G802551


Basic Information

Item Value
gene id G802551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39233311 ~ 39237404 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913270
gTTTAAATAGAAATTTGTATTTACATCAATATTAACATCAAGAAACAAGTAAGAAAAAAATGCAACAGTAATTTACATCCTGAAATTATGAcctgTTATTTTATTCCCCCATCTTTCCACTTAATCAAAGGGTAGATACATCAAGAggaatcttctttttttttttaagcaaaaGCACGGAAAACAGTTATTTTGAATATTCAGTAGGCAAATATTTTTTAATATACTTCATCAAGactgaaacaaaaaaaaaatcactctAGGCTACTCCATGATGTAATGAAGTTTCCATCAAACAGCTTAAAGATACTCTCCGTTGTGTTAAAAGATAAGATAGCATTGAAGCCATTGTAAATAGTTTTAGAGTCCATGGGATAGTCTCTTATCGTCAGACGTTCTACCTCAGGTTAGTGCCACTAAAATAGCTTCTTTTCTGAGTGGTCAATCTCATGAAACAACTGTTTCCCGCACCACAACTTTGAACTGGCCATACATTATAAGAgataaaaaaaatcaagaaaataaaACAACAATTACAAACAAGATTAAAATCACTTCAGCAGAATCAGACCCATGTTAGCTCTATGTGGTGTATGAatgggaatacacacacacacacacacacacaaagaaaaacaGATTACATGTAGGTTGTGCAGCAGAGAAATACACACGCCAGTAGAGTACTTGCACCATCTACAACCGGTTTCTAAGCACTGcagaatgacaaaacaaaaatctTTGGATTGAGCATGTCTTAAAAGATTTTCTCACAAAGCTTCACAGAAAATACTACAATGTAAATGCAATATCAAGGTTCAACATAAAACCATGTAAAATGTCCCAAAATAACCTTcaaaccagacagagagagagggaaatccAAATAACCCTCTAGTTTACAGCCTTCCTCAACATGAGCTGACTCTTCCTATTGACAAAGCGAAGCCACAAATATAACTAACCGCAGTGTTACTGCCCACATACAGTAAAAAACCGACCACCACAAACCAGCATCTGTGCCCAACGGAAGGGGAGAAAACTAGAGAAGCAGTCTTGATATTGTAACGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAATCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATGGAATTATAAGGAATggaactatttttatttttttatttaaccttttaagtcagttaagaaaaactcttatttacaatgacggcctaccccgccAAACGCTGGGCCAACTCCCAATCACaaccggatgtgatgcagcctggatttgaaccaggtattGCAGTGATgccttttgcactgagatgcagtgtcttagaccacagTGCCACTTGGGAGCCTGAGTAGTAGAGCCATTGGAGTCATAGGGCCCTATCTAAAAAATATCAATCCACACACTGGTAAGAAACATGGACCCTCATAAGTCTAACACAATCACATAAATCCTCTTCTGGcattgtgtgtgtttgattgctcttaaaacaaaacaaatctaTTAATAGAAAAAGACAGGATCACACAAGCATCTCTAAATATACACAATGTCTTTGAAAAAGAGAAATGTATGATTTATAGAtcacaaataaaaaaaagtgttttctgAGAGAACAAAAGTGGCAGTTGTAGCTTTCTGAGAGAAATCGAGCCAAAGTATTTCAGTATTGATCAGAGAAATAGCCCCTTGCTTTTCGCCCATGGTTAAAGTATTGAAAATAAAAGCTGTCTTGACCTACGACATAATAAGAAAATTATACTTTAAATATCTAGCCTGACAATCTGTGCAAAAACAGTATGTGACCTACAAAagcatatatttatatatatatataatacatttgAAGCGTATGTACAATTTATATTCACAGACAAAATGTTAAAAAATCCAAACAAGATGAGTAGTATCCTAATACTGCAGTACCATCGTTTTGACTTTGAGTAAATGATGCTTCACTTTGCCCTCACAGGAGAACCAAGACAAAATATTATTGCTAGAAATCTGCATAAACATACATTAAAATCAGGGATACCCTTTCTTTCACAGTGTGTGGATTACTTTAGGAATTAACTTATTCAATAACTGGCAAAAAATCGCTATCAAGTGTTCCATGAGGTAACCAAGAATGTAAATCTTACGAATTACTCCTTAAAAATACAATATACTCACCTTTTTTTAAATGATCATTTATGAATAGTTGTATAGATATTGAGGGTAATTTTGCCCTCTGAAATAGGTCAGCACATTTTAAGGATCGACTTTAATAATCAGAACCTTTGAAATCCACTAACTTTCCCATAATCAACACACTGCAGAAGAAAGTGTTCTATAAAATCTGTGCTTACTGCCTTTCAATTGGTTAACCATTTAGAATAATGATCGTCACGGTAATCCATTTCCAATCAAAATAGTCCCCATCCTCCGACACACACAAAAGCAAAACAAGATTTTCTGTTATGCATTCATTCTTGGGTAAAGGCCTCTATGACCAAGAAATATTTCCACAATCCTTTTGACGACAGCCTTTCCGTAAAGTGCAATCACAGCCAACTAGTATTTATTTCTGTCGTACCTTAACCCAGTCTCCTGCAGGACCACTGTGTATGTATACTGACTCTCAATTACTTACTTCGGAGTTGTTTCATTGACTATAGGCCTGCTCATCAGTATAGTAATTTATCTTATAGAGGTAGAAGTTGCCCAtgaccacagatctaggatcagtgtcCCTAATATTAACTATTAGGGGGATGTGAAAATAGCTGACCCTGTGTCAGTGATTACAAGCAACTCCCACCTTCTCCAGCAATGGGACTACATCATGTGTATTATGTCATTCATTAAGAGTGGATTCAGAGACCGGATGGGATACACTGCATACACAGTGGTCCTTCAGGACCAGAACTAGGGAATAATTCCTCCAATGTTTCGAAGCAGAGAGAGAATTCCCATGCCCAGGGGTGAACAAAGCGTTAGTTACATCCCACGAGAGGATGTCTTCTCATGTCTGTCCATCCGTCCCCCCGTCCGTGTCTGTCAGAGCCAGATCATTATTAGTTGGGTGTCCCCCGCTTCAGTCTGTTTGGTCCAGCGAGTGGCGTGTgtccagtacagtacagacaTAGAACCCAGAGAGAGGACTAATGAAACTACATCACTAAAGACTGATGGAGGAATGAAACAGTTGTGTATctgtcagtttgtgtgtgtgtgtcacagtgcgTCTCCGCTTTACATACGTGACtgtttttgagtgtgtgtgtgtgtgttggtgggtcaTGGCGTGTCTCATGTAAGTGCATGTAGAATAGAGTGTGTCCTCGGTCTTGTTTTGTGAGACTGTCCTTGAGTTCAGAGGAACAGCACCCCCAACTGGTGGGAGTAGAATACCACTCACAGGTACATTTGGTCCGGCACACACTGAGCActgcactcctctctctgaaAGGGATCACATTGAGTCCGTTTCTGTTCCACCACACGCCTCG
>TU913271
gTTTAAATAGAAATTTGTATTTACATCAATATTAACATCAAGAAACAAGTAAGAAAAAAATGCAACAGTAATTTACATCCTGAAATTATGAccgtatacccccccATCTTTCCACTTAATCAAAGGGTAGATACATCAAGAggaatcttctttttttttttaagcaaaaGCACGGAAAACAGTTATTTTGAATATTCAGTAGGCAAATATTTTTTAATATACTTCATCAAGactgaaacaaaaaaaaaatcactctAGGCTACTCCATGATGTAATGAAGTTTCCATCAAACAGCTTAAAGATACTCTCCGTTGTGTTAAAAGATAAGATAGCATTGAAGCCATTGTAAATAGTTTTAGAGTCCATGGGATAGTCTCTTATCGTCAGACGTTCTACCTCAGGTTAGTGCCACTAAAATAGCTTCTTTTCTGAGTGGTCAATCTCATGAAACAACTGTTTCCCGCACCACAACTTTGAACTGGCCATACATTATAAGAgataaaaaaaatcaagaaaataaaACAACAATTACAAACAAGATTAAAATCACTTCAGCAGAATCAGACCCATGTTAGCTCTATGTGGTGTATGAatgggaatacacacacacacacacacacacaaagaaaaacaGATTACATGTAGGTTGTGCAGCAGAGAAATACACACGCCAGTAGAGTACTTGCACCATCTACAACCGGTTTCTAAGCACTGcagaatgacaaaacaaaaatctTTGGATTGAGCATGTCTTAAAAGATTTTCTCACAAAGCTTCACAGAAAATACTACAATGTAAATGCAATATCAAGGTTCAACATAAAACCATGTAAAATGTCCCAAAATAACCTTcaaaccagacagagagagagggaaatccAAATAACCCTCTAGTTTACAGCCTTCCTCAACATGAGCTGACTCTTCCTATTGACAAAGCGAAGCCACAAATATAACTAACCGCAGTGTTACTGCCCACATACAGTAAAAAACCGACCACCACAAACCAGCATCTGTGCCCAACGGAAGGGGAGAAAACTAGAGAAGCAGTCTTGATATTGTAACGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAATCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATTGTAATGACTCTGGGTTGTCTATAATAGCATACCTGTGAGCACATAGTCGCTGTTAAGTAGCCTGGCCAATTATAGAGTATGGAATTATAAGGAATggaactatttttatttttttatttaaccttttaagtcagttaagaaaaactcttatttacaatgacggcctaccccgccAAACGCTGGGCCAACTCCCAATCACaaccggatgtgatgcagcctggatttgaaccaggtattGCAGTGATgccttttgcactgagatgcagtgtcttagaccacagTGCCACTTGGGAGCCTGAGTAGTAGAGCCATTGGAGTCATAGGGCCCTATCTAAAAAATATCAATCCACACACTGGTAAGAAACATGGACCCTCATAAGTCTAACACAATCACATAAATCCTCTTCTGGcattgtgtgtgtttgattgctcttaaaacaaaacaaatctaTTAATAGAAAAAGACAGGATCACACAAGCATCTCTAAATATACACAATGTCTTTGAAAAAGAGAAATGTATGATTTATAGAtcacaaataaaaaaaagtgttttctgAGAGAACAAAAGTGGCAGTTGTAGCTTTCTGAGAGAAATCGAGCCAAAGTATTTCAGTATTGATCAGAGAAATAGCCCCTTGCTTTTCGCCCATGGTTAAAGTATTGAAAATAAAAGCTGTCTTGACCTACGACATAATAAGAAAATTATACTTTAAATATCTAGCCTGACAATCTGTGCAAAAACAGTATGTGACCTACAAAagcatatatttatatatatatataatacatttgAAGCGTATGTACAATTTATATTCACAGACAAAATGTTAAAAAATCCAAACAAGATGAGTAGTATCCTAATACTGCAGTACCATCGTTTTGACTTTGAGTAAATGATGCTTCACTTTGCCCTCACAGGAGAACCAAGACAAAATATTATTGCTAGAAATCTGCATAAACATACATTAAAATCAGGGATACCCTTTCTTTCACAGTGTGTGGATTACTTTAGGAATTAACTTATTCAATAACTGGCAAAAAATCGCTATCAAGTGTTCCATGAGGTAACCAAGAATGTAAATCTTACGAATTACTCCTTAAAAATACAATATACTCACCTTTTTTTAAATGATCATTTATGAATAGTTGTATAGATATTGAGGGTAATTTTGCCCTCTGAAATAGGTCAGCACATTTTAAGGATCGACTTTAATAATCAGAACCTTTGAAATCCACTAACTTTCCCATAATCAACACACTGCAGAAGAAAGTGTTCTATAAAATCTGTGCTTACTGCCTTTCAATTGGTTAACCATTTAGAATAATGATCGTCACGGTAATCCATTTCCAATCAAAATAGTCCCCATCCTCCGACACACACAAAAGCAAAACAAGATTTTCTGTTATGCATTCATTCTTGGGTAAAGGCCTCTATGACCAAGAAATATTTCCACAATCCTTTTGACGACAGCCTTTCCGTAAAGTGCAATCACAGCCAACTAGTATTTATTTCTGTCGTACCTTAACCCAGTCTCCTGCAGGACCACTGTGTATGTATACTGACTCTCAATTACTTACTTCGGAGTTGTTTCATTGACTATAGGCCTGCTCATCAGTATAGTAATTTATCTTATAGAGGTAGAAGTTGCCCAtgaccacagatctaggatcagtgtcCCTAATATTAACTATTAGGGGGATGTGAAAATAGCTGACCCTGTGTCAGTGATTACAAGCAACTCCCACCTTCTCCAGCAATGGGACTACATCATGTGTATTATGTCATTCATTAAGAGTGGATTCAGAGACCGGATGGGATACACTGCATACACAGTGGTCCTTCAGGACCAGAACTAGGGAATAATTCCTCCAATGTTTCGAAGCAGAGAGAGAATTCCCATGCCCAGGGGTGAACAAAGCGTTAGTTACATCCCACGAGAGGATGTCTTCTCATGTCTGTCCATCCGTCCCCCCGTCCGTGTCTGTCAGAGCCAGATCATTATTAGTTGGGTGTCCCCCGCTTCAGTCTGTTTGGTCCAGCGAGTGGCGTGTgtccagtacagtacagacaTAGAACCCAGAGAGAGGACTAATGAAACTACATCACTAAAGACTGATGGAGGAATGAAACAGTTGTGTATctgtcagtttgtgtgtgtgtgtcacagtgcgTCTCCGCTTTACATACGTGACtgtttttgagtgtgtgtgtgtgtgttggtgggtcaTGGCGTGTCTCATGTAAGTGCATGTAGAATAGAGTGTGTCCTCGGTCTTGTTTTGTGAGACTGTCCTTGAGTTCAGAGGAACAGCACCCCCAACTGGTGGGAGTAGAATACCACTCACAGGTACATTTGGTCCGGCACACACTGAGCActgcactcctctctctgaaAGGGATCACATTGAGTCCGTTTCTGTTCCACCACACGCCTCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913270 False 4070 lncRNA 0.39 2 39233311 39237404
TU913271 True 4065 lncRNA 0.39 2 39233311 39237404

Neighbor

gene id symbol gene type direction distance location
LOC110532017 LOC106571931 coding downstream 213850 38996511 ~ 39019461 (-)
LOC110532015 LOC106566767 coding downstream 391626 38839265 ~ 38841685 (-)
LOC110532016 NA coding downstream 685264 38545204 ~ 38548047 (-)
LOC110532012 cdh4 coding downstream 792481 38052715 ~ 38440830 (-)
LOC110532008 LOC106571920 coding downstream 1255962 37961139 ~ 37977349 (-)
LOC110532021 LOC106571935 coding upstream 21084 39258488 ~ 39261833 (-)
LOC110532022 LOC106571939 coding upstream 29921 39267325 ~ 39270815 (-)
baz2a LOC106571938 coding upstream 35418 39272822 ~ 39315559 (-)
LOC110532024 ptges3 coding upstream 88582 39325986 ~ 39334154 (-)
LOC110532025 LOC107737655 coding upstream 100502 39337906 ~ 39354045 (-)
G802465 NA non-coding downstream 94326 39135095 ~ 39138985 (-)
G802189 NA non-coding downstream 123410 39109687 ~ 39109901 (-)
G802170 NA non-coding downstream 135513 39097575 ~ 39097798 (-)
G802160 NA non-coding downstream 143926 39089171 ~ 39089385 (-)
G802155 NA non-coding downstream 149728 39083384 ~ 39083583 (-)
G802558 NA non-coding upstream 10355 39247759 ~ 39248464 (-)
G802564 NA non-coding upstream 50617 39288021 ~ 39300633 (-)
G802606 NA non-coding upstream 158092 39395496 ~ 39395769 (-)
G802623 LOC106571947 non-coding upstream 244124 39481528 ~ 39542652 (-)
G802672 adcy6 non-coding upstream 268403 39505807 ~ 39507225 (-)
G802149 LOC106581475 other downstream 158591 39074481 ~ 39074720 (-)
G802138 NA other downstream 171930 39050530 ~ 39061381 (-)
G802100 NA other downstream 237279 38966456 ~ 38996032 (-)
G800318 NA other downstream 1888164 37344395 ~ 37345147 (-)
G802602 LOC106571943 other upstream 143346 39380750 ~ 39383210 (-)
G802609 NA other upstream 173938 39411342 ~ 39414326 (-)
G803170 LOC106571959 other upstream 706676 39944080 ~ 39949140 (-)
LOC110531168 LOC106571968 other upstream 724063 39961467 ~ 39996984 (-)
selenok selenok other upstream 1158328 40395732 ~ 40450018 (-)

Expression


Co-expression Network