G802241


Basic Information

Item Value
gene id G802241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39258408 ~ 39259969 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912928
CACTTACTGCAAGCCAACGCAACACAGGGCATTAAATGCCGTACTGGTATAATGGAGTTAACAAAACACGATGACACACATTTTGTATCAAGTTTTTTTGGTTTATTTTCATTTAAATATGGTTTAAACTGCCTTATGCTGACATTAAAGATCAAATCATAAAAGGAGACTTCATGAAAAGCTTACGCAGCCATTCTGTAGTGAGAGGAATCAGTCCGGTTTGGGATACAACATTTCCTTTaaaattctttttttttctttttctgaaCAAAAAAGCAGATGATTTGTGTAAAAATGAATATCATAGCAAATACCACAGTGAGGGGAGGATAAGTTATATGTCTTAAAAATTGATAACGTAATGAAAGATAATCATGATACGAACAGGAGAGTGGTCATGAAAAGAAAACAAAATGAAAAGTACTGTTTCTGCGAACTCGATTAAACACGAATTCACATACGGACGCACACTCACTGGCAAACACACTCACGCAcaaacaggcacacacgcactcactctcactcacacacacacatactgtagaagcacccacactcacgcacgcacacacagatAAATTGAAGTGATTTGAAAAATGAAACCCTGGTAAAAATCTAATGGTATCATACATCCACGTCTTGTGTCTGAAGTGCAGAAAACAACTGGAAAAAAATTGAGAGCGATAAATCAGATGCATAATGAAAAAGCATGCCCATCTTCACTGATCTAACACAACCCTATCCGACTAAAAACCTGTTGCCCCTCTATCCTCACCCCAACCCCTCTATCCTATACCCTTACCTGCCCAAAGCCCACCCATGCCCTTACCTCTTACCCCACCCATACCTACATCCCCACTGGGcaaacactggttgaatcaacgttgtttccacgtcatttcaatgaaacgACGTGGAACCAATGTgggaattgacgtctgtgcccagtgggtgccCACCTACACCTCACCCACATGCTTCTGTTGTGACAGGTCTGGTCCTTGTGTCTATGTGGATCGGGCCCTCCCTGTTCGCCTCTATCAAACACAATGTCCAATTCAGTATACAGagtgaggttggagggagagaagtCTCGTTGCATGTTGAGGTTGAAGGTTGTGAACCTgtctgtgtatgggtgtgtatgagtgtgtgtacagtTTGTGTATAAATACACGTCTGAATCTGCATGTTTAGTCAGTGTGTctcaatgtgagtgtgtgtgtctgtgtgttagttagtgagtctgtgtgagtgagtgtgtgtgtgtgtgttgacgggTTGGGGGTAGCACGGGGGTTGGTCGACACAGGGCCTGTCCCTCATCCCCGTCCCCAGATAGGGACAGGCTTATAGGGCTTGTGTCTTGAGCTCGATGGGCTCCCCGCGGGCGTCCTGCTGGGTCTCCGTCTCGGGGGGTCGGCTGCCCTTCAGTGTGGCCAGGCGCTCAGAAAGACCGCGCATGCGGGGAAACAGCATGAAATCGTACAGAAGAGCTCCCATAGCACCTCCTATCATGGGA

Function

NR:

description
lens fiber major intrinsic protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912928 True 1522 lncRNA 0.45 2 39258408 39259969

Neighbor

gene id symbol gene type direction distance location
LOC110532020 LOC106571937 coding upstream 1782 39240179 ~ 39256626 (+)
LOC110531165 LOC106571934 coding upstream 21000 39111355 ~ 39237408 (+)
LOC110532019 LOC106571933 coding upstream 186023 39064150 ~ 39072385 (+)
LOC110532013 LOC106571930 coding upstream 348690 38886624 ~ 38909718 (+)
LOC110532014 LOC106571929 coding upstream 373761 38868269 ~ 38884647 (+)
LOC110532026 LOC106571943 coding downstream 115399 39375368 ~ 39383225 (+)
ddx23 LOC106571944 coding downstream 141066 39401035 ~ 39411199 (+)
adcy6a LOC106566714 coding downstream 205962 39465931 ~ 39513879 (+)
LOC110532032 NA coding downstream 241284 39501253 ~ 39503641 (+)
g6pd LOC106571947 coding downstream 271490 39531459 ~ 39542666 (+)
G802231 NA non-coding upstream 42045 39215311 ~ 39216363 (+)
G802222 NA non-coding upstream 50624 39207537 ~ 39207784 (+)
G802169 NA non-coding upstream 160627 39097494 ~ 39097781 (+)
G802158 NA non-coding upstream 170568 39087611 ~ 39087840 (+)
G802292 NA non-coding downstream 62647 39322616 ~ 39322837 (+)
G802191 NA non-coding downstream 66061 39326030 ~ 39384896 (+)
G802195 LOC107737655 non-coding downstream 77937 39337906 ~ 39339194 (+)
G802313 NA non-coding downstream 130329 39390298 ~ 39390539 (+)
G802317 NA non-coding downstream 137909 39397878 ~ 39398093 (+)
G801851 NA other upstream 324540 38932952 ~ 38933868 (+)
G801778 NA other upstream 470054 38788061 ~ 38788354 (+)
G800834 NA other upstream 1186975 38070216 ~ 38071433 (+)
G802324 LOC106571945 other downstream 155906 39415875 ~ 39417460 (+)
spryd4 LOC106571951 other downstream 379285 39639241 ~ 39640889 (+)
G802821 NA other downstream 529688 39789657 ~ 39790402 (+)
G802822 NA other downstream 531948 39791917 ~ 39792333 (+)

Expression


Co-expression Network