G802609


Basic Information

Item Value
gene id G802609
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39411342 ~ 39414326 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913332
gggggccgaatactttcgcaaggcactgtatctttatTATTGCATGTATGATTATTTTAGGACTATTTGCACATTATGGTCAGAACAGGAACCATAGACTCTTTCTGGATAAACAAAAGTAGGAATGTCTACATTTTACTTATCTGCTATGGGAAATAGTAATGCATCCGAATATATATTGTACATATTGAATGGGCACCTGGTTATAATCAacttggtctcagagcatttagtattattctgtatgtaaatcctgGACACtcaattaagtatatgttacgtttcatatggtatgtactAATTTGTGAATGTCAATCAgtcatttcatatgatatgtgtCAATTACAATTCATAAGATATGTTACAAatctgcaaaatgtacaatacGTTGAGAATTTGCataacgtacaatatgttacggaATTCGCTATCCgtataatatgttacgaattccaattagttgtggctaacgttagctaggtggctaacgttagctacactagaggttagggttaggagatagGTTAacaggttaggggaagggttagctaaatgAGTTACGGTTAGGCTAATTTTTCAAGGAAGGGttagctaagtagttgcaaagtagctaaaaagtagtagttgctaattagctaaaattgcCAGTGATGAGAttcacgcaacctttgggttgctagacattcgcgTTATACGCCCACTCATCCACTCTGCTCAATCACTCATCGTTTTTTGCCTttagtaaccttctgtcttatgtaaccataccaaacataacatactaatttgagtgtcctggatttacattgactatgttatgtctagtctatgagaccaggctgttataagtatttatatttttgggttTATTTAATTTTGTCAGTATGGACTTCTTCCTGATTTCAGTTCAGATAGTTTTTACTGAGAAGATGCTGAATGTTTTGGGAGAGGCACAGGTACGCAGGCCTCAATACGGTGATCTGTATGTTAGTGCCGTAAAGCTGCAGTATATTCACATATCTTGTTTCTGTCATTACACATATCACCATGAGTTATGAAGGGAATGTATCAAATCAATATTACtcttaacacacacagacaagcaaaCATCCgtggaagctgctgaggggaggacggctcataataatggctggaaaggagcaaatggaatggcatcaaacacatggaaacattaaggtgccaccaacctcctgtggcacACAGAGGCACatgcaagcagacacacacacacaaattcaggCATCAAAAGAATGCAATATCGCATGCCTTTTTTACGACTCCAGCTGCCCCTAGTGGTGGGCTGATCTCACTCCTTCCTCTGATTGTCCTCCAGTTGTGGAGCACATTTTTTATTGTAGCATCCGCACAACGTCCCTTTTACACTCACTTATATGAGTCTCCAAACAccaggcaagagagagagagagcacttcaTACCAAGCACAACCTATTCAGGCTGTTTGGAAGAGTTTGTCAGACACATTCAACACATAGCATCTCCTCTGAACCCCTTTGTTTCAACTGTctctatactgtatgtgtactgcaGTTTTACTGTCAACCTCACGAAGCAGATCCACAAGTCTACCTATATCGGAAGGTTTTTGATCCAACCAATCACTTATTTGTGCTCAACTGATCACTACATTCATTGGCTAATTATGTGTGGAACTTGTGATGTGGTCTCCTGGATTTCAAAAGGACTCACAGCTATAGCAACTGTGACATGATACCATATACCTGCATGGTTAGTCTATGAACCGATCAGTTGGGCATATTGTGGAACAAAGATCTGCATGAACAGGGTCCCTGCGGACCAAGTCTGGGGACTAACTGGTCTACTGCTTCCATGTCTAATAGGCAACTTTATAGTGTTCTGTATTATTTGAAAAATCACAGCATGattgaaaaaaataagaaaataattcTATGCAAGTGTTGCATGAAACCTGATTGTTTATTTTTGCAGTTCTTCTACACTTTTAATGCATCGATTCTGATTCTCCTCGTTATTTCTTAGTAATATTCTTGTCCACGATTCTGTTTGTAAAAAGGCAGTCACTCCTCTGAGTTACAAATTAACCACAATTAATTAACCATTTAAAAAGCAGAATGCATCTCAAATATGGAGTAACCTGACTATAACGGGGAATAATGAAACATAGATTAAAATTACAACATTAATGAATAAGGAGAAGTGCGGGTACAGGTTCCGACACGTGTATTCACTAGAAACGGAAAAGGGAAAACTGTTGAGTATTTTCTTCCCCCAGAATTCTCTCTCTTAACGATACAAACAAAAAGGCAGATTTTTTGTTAATTGCacaaaatgttttactttagaATGTGTGTTCTATTGAGCACAGTTTGGATTGGCTCTGAAGCTATTTATTCCCACCTGCTCCTCGACAAcctatcagagagagagggattgagcgATTTGCTAAATGCAGCCTTGCAAGTCTTCGCTCAATTAAGACATTTTCACTGTACTTTGGAGGAATGTGACTTTCAAAGCGGACCAATGTAGTAATTGACAATGAAAAGGTTTTTCGATTTATGAAGCACAATTTATACAAGGGTTATAGTTTAGTTTCCTGTCTTATATTCTGTATGCAATACAAAGCCTAACATTGAAAGAGTTAAAAACGCCTTAACCCTTCTGAACTTCCTCTTTTTTTGTGTAAGTAGAAGAAAAACCCATTGCACTAATTTTGTTTTTTGATGGTTGCTTTGTAATGCAATAACTGCACTAAATTATAACCATGTATTATCTATTCACCGGACTCAATCACAGTGTGCTAGCGTGACCCGACGCTCCTTTCCTCAATTTCTGAgacgaaaaaaaaaaaagagatttcCTGCCTGTCGCTGTATAGAATGCTTTCTATTTAAGAATATATTAGTAAAAATGCTAAGTAAAATAAAACTAAGTAAAATAAACATTACATTTTATGTACTTTT
>TU913331
gggggccgaatactttcgcaaggcactgtatctttatTATTGCATGTATGATTATTTTAGGACTATTTGCACATTATGGTCAGAACAGGAACCATAGACTCTTTCTGGATAAACAAAAGTAGGAATGTCTACATTTTACTTATCTGCTATGGGAAATAGTAATGCATCCGAATATATATTGTACATATTGAATGGGCACCTGGTTATAATCAacttggtctcagagcatttagtattattctgtatgtaaatcctgGACACtcaattaagtatatgttacgtttcatatggtatgtactAATTTGTGAATGTCAATCAgtcatttcatatgatatgtgtCAATTACAATTCATAAGATATGTTACAAatctgcaaaatgtacaatacGTTGAGAATTTGCataacgtacaatatgttacggaATTCGCTATCCgtataatatgttacgaattccaattagttgtggctaacgttagctaggtggctaacgttagctacactagaggttagggttaggagatagGTTAacaggttaggggaagggttagctaaatgAGTTACGGTTAGGCTAATTTTTCAAGGAAGGGttagctaagtagttgcaaagtagctaaaaagtagtagttgctaattagctaaaattgcCAGTGATGAGAttcacgcaacctttgggttgctagacattcgcgTTATACGCCCACTCATCCACTCTGCTCAATCACTCATCGTTTTTTGCCTttagtaaccttctgtcttatgtaaccataccaaacataacatactaatttgagtgtcctggatttacattgactatgttatgtctagtctatgagaccaggctgttataagtatttatatttttgggttTATTTAATTTTGTCAGTATGGACTTCTTCCTGATTTCAGTTCAGATAGTTTTTACTGAGAAGATGCTGAATGTTTTGGGAGAGGCACAGGTACGCAGGCCTCAATACGGTGATCTGTATGTTAGTGCCGTAAAGCTGCAGTATATTCACATATCTTGTTTCTGTCATTACACATATCACCATGAGTTATGAAGGGAATGTATCAAATCAATATTACtcttaacacacacagacaagcaaaCATCCgtggaagctgctgaggggaggacggctcataataatggctggaaaggagcaaatggaatggcatcaaacacatggaaacattaaggtgccaccaacctcctgtggcacACAGAGGCACatgcaagcagacacacacacacaaattcaggCATCAAAAGAATGCAATATCGCATGCCTTTTTTACGACTCCAGCTGCCCCTAGTGGTGGGCTGATCTCACTCCTTCCTCTGATTGTCCTCCAGTTGTGGAGCACATTTTTTATTGTAGCATCCGCACAACGTCCCTTTTACACTCACTTATATGAGTCTCCAAACAccaggcaagagagagagagagcacttcaTACCAAGCACAACCTATTCAGGCTGTTTGGAAGAGTTTGTCAGACACATTCAACACATAGCATCTCCTCTGAACCCCTTTGTTTCAACTGTctctatactgtatgtgtactgcaGTTTTACTGTCAACCTCACGAAGCAGATCCACAAGTCTACCTATATCGGAAGGTTTTTGATCCAACCAATCACTTATTTGTGCTCAACTGATCACTACATTCATTGGCTAATTATGTGTGGAACTTGTGATGTGGTCTCCTGGATTTCAAAAGGACTCACAGCTATAGCAACTGTGACATGATACCATATACCTGCATGGTTAGTCTATGAACCGATCAGTTGGGCATATTGTGGAACAAAGATCTGCATGAACAGGGTCCCTGCGGACCAAGTCTGGGGACTAACTGGTCTACTGCTTCCATGTCTAATAGGCAACTTTATAGTGTTCTGTATTATTTGAAAAATCACAGCATGattgaaaaaaataagaaaataattcTATGCAAGTGTTGCATGAAACCTGATTGTTTATTTTTGCAGTTCTTCTACACTTTTAATGCATCGATTCTGATTCTCCTCGTTATTTCTTAGTAATATTCTTGTCCACGATTCTGTTTGTAAAAAGGCAGTCACTCCTCTGAGTTACAAATTAACCACAATTAATTAACCATTTAAAAAGCAGAATGCATCTCAAATATGGAGTAACCTGACTATAACGGGGAATAATGAAACATAGATTAAAATTACAACATTAATGAATAAGGAGAAGTGCGGGTACAGGTTCCGACACGTGTATTCACTAGAAACGGAAAAGGGAAAACTGTTGAGTATTTTCTTCCCCCAGAATTCTCTCTCTTAACGATACAAACAAAAAGGCAGATTTTTTGTTAATTGCacaaaatgttttactttagaATGTGTGTTCTATTGAGCACAGTTTGGATTGGCTCTGAAGCTATTTATTCCCACCTGCTCCTCGACAAcctatcagagagagagggattgagcgATTTGCTAAATGCAGCCTTGCAAGTCTTCGCTCAATTAAGACATTTTCACTGTACTTTGGAGGAATGTGACTTTCAAAGCGGACCAATGTAGTAATTGACAATGAAAAGGTTTTTCGATTTATGAAGCACAATTTATACAAGGGTTATAGTTTAGTTTCCTGTCTTATATTCTGTATGCAATACAAAGCCTAACATTGAAAGAGTTAAAAACGCCTTAACCCTTCTGAACTTCCTCTTTTTTTGTGTAAGTAGAAGAAAAACCCATTGCACTAATTTTGTTTTTTGATGGTTGCTTTGTAATGCAATAACTGCACTAAATTATAACCATGTATTATCTATTCACCGGACTCAATCACAGTGTGCTAGCGTGACCCGACGCTCCTTTCCTCAATTTCTGAgacgaaaaaaaaaaaagagatttcCTGCC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU913332 False 2985 TUCP 0.38 1 39411342 39414326
TU913331 True 2887 TUCP 0.38 1 39411440 39414326
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110532028 prim1 coding downstream 48221 39354229 ~ 39363121 (-)
LOC110532025 LOC107737655 coding downstream 57297 39337906 ~ 39354045 (-)
LOC110531166 LOC106571945 coding upstream 1524 39415850 ~ 39444499 (-)
LOC110532033 NA coding upstream 100267 39514593 ~ 39518610 (-)
LOC110532036 LOC106571950 coding upstream 131585 39545911 ~ 39556753 (-)
LOC110532037 LOC106571949 coding upstream 145621 39559947 ~ 39634862 (-)
LOC110532039 LOC106571948 coding upstream 226553 39640879 ~ 39675631 (-)
G802606 NA non-coding downstream 15573 39395496 ~ 39395769 (-)
G802564 NA non-coding downstream 110709 39288021 ~ 39300633 (-)
G802558 NA non-coding downstream 162878 39247759 ~ 39248464 (-)
G802551 NA non-coding downstream 173938 39233311 ~ 39237404 (-)
G802465 NA non-coding downstream 272357 39135095 ~ 39138985 (-)
G802623 LOC106571947 non-coding upstream 67202 39481528 ~ 39542652 (-)
G802672 adcy6 non-coding upstream 91481 39505807 ~ 39507225 (-)
G803065 NA non-coding upstream 267962 39682288 ~ 39682492 (-)
G803080 NA non-coding upstream 316638 39730964 ~ 39731196 (-)
LOC110532044 LOC106571954 non-coding upstream 329036 39743362 ~ 39773871 (-)
G802602 LOC106571943 other downstream 28132 39380750 ~ 39383210 (-)
G802149 LOC106581475 other downstream 336622 39074481 ~ 39074720 (-)
G802138 NA other downstream 349961 39050530 ~ 39061381 (-)
G802100 NA other downstream 415310 38966456 ~ 38996032 (-)
LOC110532015 LOC106566767 other downstream 569830 38839265 ~ 38841685 (-)
G803170 LOC106571959 other upstream 529754 39944080 ~ 39949140 (-)
LOC110531168 LOC106571968 other upstream 547141 39961467 ~ 39996984 (-)
selenok selenok other upstream 981406 40395732 ~ 40450018 (-)
G804137 LOC106572278 other upstream 1156688 40571014 ~ 40573950 (-)
G804307 NA other upstream 1448263 40862589 ~ 40912358 (-)

Expression

G802609 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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G802609 Expression in each Bioproject

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G802609 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
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Co-expression Network