G802324 (LOC106571945)


Basic Information

Item Value
gene id G802324
gene name LOC106571945
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39415875 ~ 39417460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913019
ggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacataaacgTCTTAGGGATTTAAGGCCAGTAAATGTGTCATTCTAAAATAGAGAAACCTTATGCAAAGAATCTTAACATTTGACTTGACCTACAGCCAGTAGTTATAGCTTGCTATTGTGGAGGTGAGTAGCCCTGTTGACGTATAGCCTTTTATCTGATTAACATGACCCCAGCTAATCAGAATGAGTAAAACCGTAAGCCTGGAAGTGTGTGATTGTAGAAGGTGGTAATGTGCACAGCAGTCAGTAATTGTTTTGGGGACAATTGGTACTACATTGTTTCCATAGTTAGGGTGAGTGGTTGGGGACAAGGAGCACACTTATTGTGTACAAGTGGGTGTCTTGTGGCCAAAGTTGTAGTTTGGGTATAGCTAGTTGTCCTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGTGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGTGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTTGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGGGGCGGCTGCGTTGGCAGTTGTTGCGCTGGTTGTGCCCCTGCTGGGCATCGCGCTGGAGCAGCCTGTCCTGTGATTCATGCCCGTTGGTGCTGTGGACGCCCCCGCGGTGACCGCGGTGAGGGGGGTACCTGTCCCTGTAAGTTTGGGCGTGGCAAGGGGACTCAAACTCATCCTCCTCATCTAGTTCCTCTTCTAATTCCTCCACCagctcctcgtcctcctcgtccCCCCGGAGGCGTGGGCCCCCAAGGAGGCCGCGGGACAGGGAGTCGCTGCCTTCTTCAGACGGCATCAGGCTGTCCTGCTCCAGAGGGGAGTGGgcctccacctcctcaccctccacccCCACACTGCTGTGCTGCACTGGGGGCTGGTTCTTATTCTGGGTCTGGGGTTTGGTgttggagagggggggagggggagggagataatAAA
>TU913020
ggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacataaacgTCTTAGGGATTTAAGGCCAGTAAATGTGTCATTCTAAAATAGAGAAACCTTATGCAAAGAATCTTAACATTTGACTTGACCTACAGCCAGTAGTTATAGCTTGCTATTGTGGAGGTGAGTAGCCCTGTTGACGTATAGCCTTTTATCTGATTAACATGACCCCAGCTAATCAGAATGAGTAAAACCGTAAGCCTGGAAGTGTGTGATTGTAGAAGGTGGTAATGTGCACAGCAGTCAGTAATTGTTTTGGGGACAATTGGTACTACATTGTTTCCATAGTTAGGGTGAGTGGTTGGGGACAAGGAGCACACTTATTGTGTACAAGTGGGTGTCTTGTGGCCAAAGTTGTAGTTTGGGTATAGCTAGTTGTCCTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGTGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTTGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGGGGCGGCTGCGTTGGCAGTTGTTGCGCTGGTTGTGCCCCTGCTGGGCATCGCGCTGGAGCAGCCTGTCCTGTGATTCATGCCCGTTGGTGCTGTGGACGCCCCCGCGGTGACCGCGGTGAGGGGGGTACCTGTCCCTGTAAGTTTGGGCGTGGCAAGGGGACTCAAACTCATCCTCCTCATCTAGTTCCTCTTCTAATTCCTCCACCagctcctcgtcctcctcgtccCCCCGGAGGCGTGGGCCCCCAAGGAGGCCGCGGGACAGGGAGTCGCTGCCTTCTTCAGACGGCATCAGGCTGTCCTGCTCCAGAGGGGAGTGGgcctccacctcctcaccctccacccCCACACTGCTGTGCTGCACTGGGGGCTGGTTCTTATTCTGGGTCTGGGGTTTGGTgttggagagggggggagggggagggagataatAAA
>TU913022
ggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacataaacgTCTTAGGGATTTAAGGCCAGTAAATGTGTCATTCTAAAATAGAGAAACCTTATGCAAAGAATCTTAACATTTGACTTGACCTACAGCCAGTAGTTATAGCTTGCTATTGTGGAGGTGAGTAGCCCTGTTGACGTATAGCCTTTTATCTGATTAACATGACCCCAGCTAATCAGAATGAGTAAAACCGTAAGCCTGGAAGTGTGTGATTGTAGAAGGTGGTAATGTGCACAGCAGTCAGTAATTGTTTTGGGGACAATTGGTACTACATTGTTTCCATAGTTAGGGTGAGTGGTTGGGGACAAGGAGCACACTTATTGTGTACAAGTGGGTGTCTTGTGGCCAAAGTTGTAGTTTGGGTATAGCTAGTTGTCCTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGTGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAAGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTTGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGGGGCGGCTGCGTTGGCAGTTGTTGCGCTGGTTGTGCCCCTGCTGGGCATCGCGCTGGAGCAGCCTGTCCTGTGATTCATGCCCGTTGGTGCTGTGGACGCCCCCGCGGTGACCGCGGTGAGGGGGGTACCTGTCCCTGTAAGTTTGGGCGTGGCAAGGGGACTCAAACTCATCCTCCTCATCTAGTTCCTCTTCTAATTCCTCCACCagctcctcgtcctcctcgtccCCCCGGAGGCGTGGGCCCCCAAGGAGGCCGCGGGACAGGGAGTCGCTGCCTTCTTCAGACGGCATCAGGCTGTCCTGCTCCAGAGGGGAGTGGgcctccacctcctcaccctccacccCCACACTGCTGTGCTGCACTGGGGGCTGGTTCTTATTCTGGGTCTGGGGTTTGGTgttggagagggggggagggggagggagataatAAA
>TU913023
ggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacataaacgTCTTAGGGATTTAAGGCCAGTAAATGTGTCATTCTAAAATAGAGAAACCTTATGCAAAGAATCTTAACATTTGACTTGACCTACAGCCAGTAGTTATAGCTTGCTATTGTGGAGGTGAGTAGCCCTGTTGACGTATAGCCTTTTATCTGATTAACATGACCCCAGCTAATCAGAATGAGTAAAACCGTAAGCCTGGAAGTGTGTGATTGTAGAAGGTGGTAATGTGCACAGCAGTCAGTAATTGTTTTGGGGACAATTGGTACTACATTGTTTCCATAGTTAGGGTGAGTGGTTGGGGACAAGGAGCACACTTATTGTGTACAAGTGGGTGTCTTGTGGCCAAAGTTGTAGTTTGGGTATAGCTAGTTGTCCTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGTGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTTGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGGGGCGGCTGCGTTGGCAGTTGTTGCGCTGGTTGTGCCCCTGCTGGGCATCGCGCTGGAGCAGCCTGTCCTGTGATTCATGCCCGTTGGTGCTGTGGACGCCCCCGCGGTGACCGCGGTGAGGGGGGTACCTGTCCCTGTAAGTTTGGGCGTGGCAAGGGGACTCAAACTCATCCTCCTCATCTAGTTCCTCTTCTAATTCCTCCACCagctcctcgtcctcctcgtccCCCCGGAGGCGTGGGCCCCCAAGGAGGCCGCGGGACAGGGAGTCGCTGCCTTCTTCAGACGGCATCAGGCTGTCCTGCTCCAGAGGGGAGTGGgcctccacctcctcaccctccacccCCACACTGCTGTGCTGCACTGGGGGCTGGTTCTTATTCTGGGTCTGGGGTTTGGTgttggagagggggggagggggagggagataatAAA
>TU913024
ggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacataaacgTCTTAGGGATTTAAGGCCAGTAAATGTGTCATTCTAAAATAGAGAAACCTTATGCAAAGAATCTTAACATTTGACTTGACCTACAGCCAGTAGTTATAGCTTGCTATTGTGGAGGTGAGTAGCCCTGTTGACGTATAGCCTTTTATCTGATTAACATGACCCCAGCTAATCAGAATGAGTAAAACCGTAAGCCTGGAAGTGTGTGATTGTAGAAGGTGGTAATGTGCACAGCAGTCAGTAATTGTTTTGGGGACAATTGGTACTACATTGTTTCCATAGTTAGGGTGAGTGGTTGGGGACAAGGAGCACACTTATTGTGTACAAGTGGGTGTCTTGTGGCCAAAGTTGTAGTTTGGGTATAGCTAGTTGTCCTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGTGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGTGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGGTACGTTAGAGATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGTGGTATGCTAGAGATGTCAGTAGTTGTCTTGGGGCCAGGGTACGTTAGAAATGTCAGTAGTTGTCTCGGGGCCAGGGGCGGCTGCGTTGGCAGTTGTTGCGCTGGTTGTGCCCCTGCTGGGCATCGCGCTGGAGCAGCCTGTCCTGTGATTCATGCCCGTTGGTGCTGTGGACGCCCCCGCGGTGACCGCGGTGAGGGGGGTACCTGTCCCTGTAAGTTTGGGCGTGGCAAGGGGACTCAAACTCATCCTCCTCATCTAGTTCCTCTTCTAATTCCTCCACCagctcctcgtcctcctcgtccCCCCGGAGGCGTGGGCCCCCAAGGAGGCCGCGGGACAGGGAGTCGCTGCCTTCTTCAGACGGCATCAGGCTGTCCTGCTCCAGAGGGGAGTGGgcctccacctcctcaccctccacccCCACACTGCTGTGCTGCACTGGGGGCTGGTTCTTATTCTGGGTCTGGGGTTTGGTgttggagagggggggagggggagggagataatAAA

Function

NR:

description
voltage-dependent L-type calcium channel subunit beta-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913019 False 1511 TUCP 0.53 2 39415875 39417460
TU913020 False 1472 TUCP 0.53 2 39415875 39417460
TU913022 False 1435 TUCP 0.53 2 39415875 39417460
TU913023 False 1435 TUCP 0.53 2 39415875 39417460
TU913024 True 1323 TUCP 0.53 2 39415875 39417460

Neighbor

gene id symbol gene type direction distance location
ddx23 LOC106571944 coding upstream 4676 39401035 ~ 39411199 (+)
LOC110532026 LOC106571943 coding upstream 32650 39375368 ~ 39383225 (+)
LOC110532020 LOC106571937 coding upstream 159249 39240179 ~ 39256626 (+)
LOC110531165 LOC106571934 coding upstream 178467 39111355 ~ 39237408 (+)
LOC110532019 LOC106571933 coding upstream 343490 39064150 ~ 39072385 (+)
adcy6a LOC106566714 coding downstream 48471 39465931 ~ 39513879 (+)
LOC110532032 NA coding downstream 83793 39501253 ~ 39503641 (+)
g6pd LOC106571947 coding downstream 113999 39531459 ~ 39542666 (+)
spryd4 LOC106571951 coding downstream 221781 39639241 ~ 39640889 (+)
LOC110532038 LOC100286410 coding downstream 268368 39685828 ~ 39715886 (+)
G802325 NA non-coding upstream 157 39414725 ~ 39415718 (+)
G802317 NA non-coding upstream 17782 39397878 ~ 39398093 (+)
G802313 NA non-coding upstream 25336 39390298 ~ 39390539 (+)
G802191 NA non-coding upstream 30979 39326030 ~ 39384896 (+)
G802195 LOC107737655 non-coding upstream 76681 39337906 ~ 39339194 (+)
G802328 NA non-coding downstream 18906 39436366 ~ 39516038 (+)
G802353 NA non-coding downstream 29623 39447083 ~ 39469432 (+)
G802392 LOC106571950 non-coding downstream 136727 39554187 ~ 39556665 (+)
G802399 NA non-coding downstream 140805 39558265 ~ 39562731 (+)
G801851 NA other upstream 482007 38932952 ~ 38933868 (+)
G801778 NA other upstream 627521 38788061 ~ 38788354 (+)
G800834 NA other upstream 1344442 38070216 ~ 38071433 (+)
G802821 NA other downstream 372197 39789657 ~ 39790402 (+)
G802822 NA other downstream 374457 39791917 ~ 39792333 (+)
G802830 LOC106571955 other downstream 392867 39810327 ~ 39812025 (+)

Expression


Co-expression Network