G802328


Basic Information

Item Value
gene id G802328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39436366 ~ 39516038 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913037
ATttaactcaggtgcatcctattttcaatgatcatccttgagatgtttttacaacttgattggagtcaacctgtttttcagcggcagggactgggagactagtcaggatcgagggaaagacgaacggagcaaagtacagagagatccttgattgaaaacctgctccagagtgctcaggacctcagactggggtgaaggttcaccttccaacaggacaacgaccctaagaacacagccaagacaacgcaggagtggcttcgggacaagtctctgaatgttcttgagtggcccagccagagcccggacttgaacccgattaaacatctcaggagagacctgaaaatagctgtgcagtgacgctccccatccaacctgacagagcttgagaggatctgcagagaagaatgggagaaactcctcaaatacaggtgtgccaagcttgtagcgtcataccaaagaagactcaaggatgtaatcgctgccaaaggtgcttcaacaaagtactgagtaaagggtctgaatatttatgtgaaTGTGAtcgtttaaaaaaaatttaaaatatgtttaaaatatatatataaaacctgtatgtgctttgtcattatggggtattgtgtgtagattgacgaggaaaatAATGATTACTGTGCTTTGTCATCTTGGAAGGCCTATAACTATTTTCACTGTGAGGTTTTAATAATGGGACAAACTGCTTTCTTGCCAAACTTAACTTCTCTAAAGCATGTCTGATTGTATTATCCTCTTTTCATTCTGTTTTTAACGTTGGGTACCTTGTATCACCTCTGTATTCATCATTTGCATTATTCTTATGGCTGTTATTATTATGATTAGAATTATGATTCATTATTATGCTCATTATGATATTTCCATTCCAACGATAAGGATCAAAGAGCAGAACGCTTTCTTTTAAAATGCCAGACGTAAGCTCAAGCTCATTGGTACCAACTGATCAACTGCAGCCAACTCACTCAGCGCTGTTccctcaccaccctacagtattcaAACACTGGCTCTAGACCTGCTGACACATACCCATTAGCTGTCGCTTTTGCATCAAACCCCAAGTGGTGCATATTCCCCAATCACGAAGGACTGAAGTGTTTACACGCAGATAAACTAATTATACACTGTACCTTTTTTTGAGCAAACACTACTTCAAGACTCGACTCAGTCAGGTGGAGAGCTGATCCCCTTCCTATCGGACTTCAGGGCAGAGAAACGGGACACAATCAGCAGTGTGAGCAGTATTTCCTACTTGAACTCAAGCTTAATTGAACAAGCCACTGGAGAATACAGTGTGAGCAGGAACTGTGCCTGATTGCCACATCTGAGTTTCACAGTATGTTATACATAGAGCAGgaagggtagagcgagagagccTGTGAAAGCTAATCTAAATCAGTTATTGACCGTAGCATTGACACAACACTGAGTTCATTTTGACTTTACGTTTCCTCATAACATCCTCAAAACACCCCAGTCATCGTTCCTCTCTCTACCATACTTAACTATGGCAACTACAGTAACAGTTGATCATGTTCGTACCAAAGCAAGCTAATACTGCCTCGTGCTATTGGTCCCTCCCAGTGCAGTGATATTTGGCCTTGAGCGTGTGGGACCGCCAGGCAACAGTAAAGGTCATGGGATCGATAAATGACATAGGTGACCAACTAAGAGTgattcacatagaaatataatacaTAGAATGGATGTGGTAAGTAAGATGATGCACGTTGTgtccattctatttctatgggctgTCCTGTCTTTGGGTTGGGTGGAGGTTGATTGTTGACTCTTGGGATGTTTTTAGGGGACAGGGGAGGAAGAGGGTTGTCCCAGTGCTACTGAAACAGTGTTTTGTTCAGGCCTAATGAACCCCTTTCGAAACACTTTcctttttgttagtttgttttctACCCCTGAGTTGAAGGACAAGAGTTGGGGACTTTGACAAAGAGAAAAATAACATTTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913037 True 1998 lncRNA 0.43 2 39436366 39516038

Neighbor

gene id symbol gene type direction distance location
ddx23 LOC106571944 coding upstream 25167 39401035 ~ 39411199 (+)
LOC110532026 LOC106571943 coding upstream 53141 39375368 ~ 39383225 (+)
LOC110532020 LOC106571937 coding upstream 179740 39240179 ~ 39256626 (+)
LOC110531165 LOC106571934 coding upstream 198958 39111355 ~ 39237408 (+)
LOC110532019 LOC106571933 coding upstream 363981 39064150 ~ 39072385 (+)
g6pd LOC106571947 coding downstream 15421 39531459 ~ 39542666 (+)
spryd4 LOC106571951 coding downstream 123203 39639241 ~ 39640889 (+)
LOC110532038 LOC100286410 coding downstream 169790 39685828 ~ 39715886 (+)
map3k12 LOC106571953 coding downstream 214910 39730948 ~ 39747079 (+)
stac3 LOC106566701 coding downstream 333713 39849751 ~ 39855939 (+)
G802325 NA non-coding upstream 20648 39414725 ~ 39415718 (+)
G802317 NA non-coding upstream 38273 39397878 ~ 39398093 (+)
G802313 NA non-coding upstream 45827 39390298 ~ 39390539 (+)
G802191 NA non-coding upstream 51470 39326030 ~ 39384896 (+)
G802195 LOC107737655 non-coding upstream 97172 39337906 ~ 39339194 (+)
G802392 LOC106571950 non-coding downstream 38149 39554187 ~ 39556665 (+)
G802399 NA non-coding downstream 42227 39558265 ~ 39562731 (+)
G802764 NA non-coding downstream 158975 39675013 ~ 39675349 (+)
G802778 NA non-coding downstream 200395 39716433 ~ 39716670 (+)
G802811 NA non-coding downstream 259429 39775467 ~ 39775699 (+)
G802324 LOC106571945 other upstream 18906 39415875 ~ 39417460 (+)
G801851 NA other upstream 502498 38932952 ~ 38933868 (+)
G801778 NA other upstream 648012 38788061 ~ 38788354 (+)
G802821 NA other downstream 273619 39789657 ~ 39790402 (+)
G802822 NA other downstream 275879 39791917 ~ 39792333 (+)
G802830 LOC106571955 other downstream 294289 39810327 ~ 39812025 (+)
LOC110532068 LOC106571971 other downstream 870727 40375272 ~ 40393967 (+)

Expression


Co-expression Network