G802392 (LOC106571950)


Basic Information

Item Value
gene id G802392
gene name LOC106571950
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39554187 ~ 39556665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913103
tattttttttaaatcacattccTGAGCAGGATTACAATACATAGCAGCATGCGATGTGCTCCTCACCACATTAGGGGGTAGCTTGTGTCCAGGCAGGTACTTGACGTTCTCATGGTCTGTGTTGATGATCTCTGTCAGTTTGCGACCGTCCACCATCTCCTCAAACACCCACATGGTCACAGTGTTGTCAAACTTGGAGTTGTGAGCAACATTGGTACCTACTATCTTGGCAATGGCAGAGCCCCAATTGCCAGAGCCAATAATGCAGACTTTCTTGGGAGTTGCCATTGAAAAGACCCTTGCCG

Function

NR:

description
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913103 True 305 lncRNA 0.47 2 39554187 39556665

Neighbor

gene id symbol gene type direction distance location
g6pd LOC106571947 coding upstream 11521 39531459 ~ 39542666 (+)
adcy6a LOC106566714 coding upstream 40308 39465931 ~ 39513879 (+)
LOC110532032 NA coding upstream 50546 39501253 ~ 39503641 (+)
ddx23 LOC106571944 coding upstream 142988 39401035 ~ 39411199 (+)
LOC110532026 LOC106571943 coding upstream 170962 39375368 ~ 39383225 (+)
spryd4 LOC106571951 coding downstream 82576 39639241 ~ 39640889 (+)
LOC110532038 LOC100286410 coding downstream 129163 39685828 ~ 39715886 (+)
map3k12 LOC106571953 coding downstream 174283 39730948 ~ 39747079 (+)
stac3 LOC106566701 coding downstream 293086 39849751 ~ 39855939 (+)
LOC110531167 LOC106571970 coding downstream 309218 39865883 ~ 39873666 (+)
G802328 NA non-coding upstream 38149 39436366 ~ 39516038 (+)
G802353 NA non-coding upstream 84755 39447083 ~ 39469432 (+)
G802325 NA non-coding upstream 138469 39414725 ~ 39415718 (+)
G802317 NA non-coding upstream 156094 39397878 ~ 39398093 (+)
G802399 NA non-coding downstream 1600 39558265 ~ 39562731 (+)
G802764 NA non-coding downstream 118348 39675013 ~ 39675349 (+)
G802778 NA non-coding downstream 159768 39716433 ~ 39716670 (+)
G802811 NA non-coding downstream 218802 39775467 ~ 39775699 (+)
G802820 NA non-coding downstream 231231 39787896 ~ 39788238 (+)
G802324 LOC106571945 other upstream 136727 39415875 ~ 39417460 (+)
LOC110531165 LOC106571934 other upstream 316926 39111355 ~ 39237408 (+)
LOC110532019 LOC106571933 other upstream 481962 39064150 ~ 39072385 (+)
G801851 NA other upstream 620319 38932952 ~ 38933868 (+)
G802821 NA other downstream 232992 39789657 ~ 39790402 (+)
G802822 NA other downstream 235252 39791917 ~ 39792333 (+)
G802830 LOC106571955 other downstream 253662 39810327 ~ 39812025 (+)
LOC110532068 LOC106571971 other downstream 830100 40375272 ~ 40393967 (+)

Expression


Co-expression Network