G803080



Basic Information


Item Value
gene id G803080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39730964 ~ 39731196 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU913869
CTTTCTGCCTCGTTGATGTCGCGTTGTCAAGTACGGGATGGGTTCAGCTTGCTACATGCGATAATTAAGAACAATTGTCGTTTTTCCTCTCCGGACTTACAGTCGTTTTATTGCGTGAAAGTCCCTTTCCACGAGTTCACGTTATCAGAACGAATCCCAGCGGGCAAATTGTGTTATCAATAACCGGGGAACCATGGAACGTGAGTCGCGCGCTGGGTTGGGGGAGGGAGCTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU913869 True 233 lncRNA 0.50 1 39730964 39731196

Neighbor


gene id symbol gene type direction distance location
LOC110532040 aaas coding downstream 6351 39717018 ~ 39724613 (-)
LOC110532039 LOC106571948 coding downstream 55333 39640879 ~ 39675631 (-)
LOC110532037 LOC106571949 coding downstream 96102 39559947 ~ 39634862 (-)
LOC110532036 LOC106571950 coding downstream 174211 39545911 ~ 39556753 (-)
LOC110532033 NA coding downstream 212354 39514593 ~ 39518610 (-)
LOC110532044 LOC106571954 coding upstream 16146 39743362 ~ 39773871 (-)
kif5aa LOC106571955 coding upstream 76176 39807372 ~ 39834620 (-)
LOC110532046 NA coding upstream 83192 39814388 ~ 39819080 (-)
LOC110532047 LOC106571956 coding upstream 103887 39835083 ~ 39848299 (-)
LOC118966202 NA coding upstream 126212 39857408 ~ 39857523 (-)
G803065 NA non-coding downstream 48472 39682288 ~ 39682492 (-)
G802623 LOC106571947 non-coding downstream 188312 39481528 ~ 39542652 (-)
G802672 adcy6 non-coding downstream 223739 39505807 ~ 39507225 (-)
G802606 NA non-coding downstream 335195 39395496 ~ 39395769 (-)
G802564 NA non-coding downstream 430331 39288021 ~ 39300633 (-)
G803094 NA non-coding upstream 31473 39762669 ~ 39765605 (-)
G803095 NA non-coding upstream 32166 39763362 ~ 39766061 (-)
G803107 NA non-coding upstream 57533 39788729 ~ 39788957 (-)
G803108 NA non-coding upstream 57956 39789152 ~ 39790285 (-)
G802609 NA other downstream 316638 39411342 ~ 39414326 (-)
G802602 LOC106571943 other downstream 347754 39380750 ~ 39383210 (-)
G802149 LOC106581475 other downstream 656244 39074481 ~ 39074720 (-)
G802138 NA other downstream 669583 39050530 ~ 39061381 (-)
G802100 NA other downstream 734932 38966456 ~ 38996032 (-)
G803170 LOC106571959 other upstream 212884 39944080 ~ 39949140 (-)
LOC110531168 LOC106571968 other upstream 230271 39961467 ~ 39996984 (-)
selenok selenok other upstream 664536 40395732 ~ 40450018 (-)
G804137 LOC106572278 other upstream 839818 40571014 ~ 40573950 (-)
G804307 NA other upstream 1131393 40862589 ~ 40912358 (-)

Expression



Co-expression Network