G802820


Basic Information

Item Value
gene id G802820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39787896 ~ 39788238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913561
taatagtagagagtgatttatttcagcttttatttctttcatcacattcccagtgggtcagaagtttacatacactcaattggtatttggtagcattgcatttaaattgtttaacttgggtcaaatgtttcaggtagccttccacaagcttcccacaataaattgggtgaattttggcccattccttctgacagagctggtgtaacggagtcaggtttgtaggcctccttgctcgcacacgctttttcagttctgcccacaaattttctatgggattgaggtcagggctttattttgtttttttgccacaactttggaagtatgcttattgtctatttggaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913561 True 343 lncRNA 0.39 1 39787896 39788238

Neighbor

gene id symbol gene type direction distance location
map3k12 LOC106571953 coding upstream 40817 39730948 ~ 39747079 (+)
LOC110532038 LOC100286410 coding upstream 72010 39685828 ~ 39715886 (+)
spryd4 LOC106571951 coding upstream 147007 39639241 ~ 39640889 (+)
g6pd LOC106571947 coding upstream 245230 39531459 ~ 39542666 (+)
LOC110532032 NA coding upstream 284255 39501253 ~ 39503641 (+)
stac3 LOC106566701 coding downstream 61513 39849751 ~ 39855939 (+)
LOC110531167 LOC106571970 coding downstream 77645 39865883 ~ 39873666 (+)
LOC110532052 LOC106571959 coding downstream 151527 39939765 ~ 39946085 (+)
LOC110532054 NA coding downstream 173233 39961471 ~ 39962986 (+)
LOC110532055 gnas coding downstream 224858 40013096 ~ 40046553 (+)
G802811 NA non-coding upstream 12197 39775467 ~ 39775699 (+)
G802778 NA non-coding upstream 71226 39716433 ~ 39716670 (+)
G802764 NA non-coding upstream 112547 39675013 ~ 39675349 (+)
G802399 NA non-coding upstream 225165 39558265 ~ 39562731 (+)
G802392 LOC106571950 non-coding upstream 231231 39554187 ~ 39556665 (+)
G802831 NA non-coding downstream 25937 39814175 ~ 39817115 (+)
G802875 NA non-coding downstream 92956 39881194 ~ 39894131 (+)
G802900 NA non-coding downstream 128901 39917139 ~ 39949106 (+)
G802919 NA non-coding downstream 162563 39950801 ~ 39951044 (+)
G802920 NA non-coding downstream 162893 39951131 ~ 39951528 (+)
adcy6a LOC106566714 other upstream 314339 39465931 ~ 39513879 (+)
G802324 LOC106571945 other upstream 370436 39415875 ~ 39417460 (+)
LOC110531165 LOC106571934 other upstream 550635 39111355 ~ 39237408 (+)
LOC110532019 LOC106571933 other upstream 715671 39064150 ~ 39072385 (+)
G802821 NA other downstream 1419 39789657 ~ 39790402 (+)
G802822 NA other downstream 3679 39791917 ~ 39792333 (+)
G802830 LOC106571955 other downstream 22089 39810327 ~ 39812025 (+)
LOC110532068 LOC106571971 other downstream 598527 40375272 ~ 40393967 (+)
G803437 selenok other downstream 654658 40442896 ~ 40449939 (+)

Expression


Co-expression Network