G802831


Basic Information

Item Value
gene id G802831
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39814175 ~ 39817115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913580
CATCTTCTGGGCCAACTGGTCGGCCAGCAGCTGGTTCTGCAGGCCTTTCTCCTCCACCTCCAGGCTCTTCTGGTCGTAGTTGATGGCCAACTCCTCAAGTGCCTGCAGCACCTCCTTCACCTCTGTCTTGGCACAGTTGCTCTCCACCTGCAGGCGGCCCAGCTCCGCCTGCACCTTGTCCCCATCCCCACGGGACGACGCCAGCAgCAACACGGGCAATCAGGGAGGCTTTATGCTTTTTCGACTGTTGATGTTCTACCACTGCCGTTCGTCCCCCGCTGCCAATTGAAAAAGAGGAATTACAAAGGGTGCAGTAAACCATTCTATTGTCTTGACCTGAGCGTATAAATGGACATTGTCTCATGTCATTGTGTCACTCTTAACTTTTTCTTCTCCTCCAATCTTTCTCCTACTCTTTTCTTCACTCCTCTTCCTGCCTTTCCTTCTCTTTACCTTTCCACCTCACTCTTCCACACTCTCCTCGCTTCACTCTTTTTACTCCCTTCAtctttccttctccttctccaatCTGTAATAATAAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913580 True 543 lncRNA 0.50 2 39814175 39817115

Neighbor

gene id symbol gene type direction distance location
map3k12 LOC106571953 coding upstream 67096 39730948 ~ 39747079 (+)
LOC110532038 LOC100286410 coding upstream 98289 39685828 ~ 39715886 (+)
spryd4 LOC106571951 coding upstream 173286 39639241 ~ 39640889 (+)
g6pd LOC106571947 coding upstream 271509 39531459 ~ 39542666 (+)
LOC110532032 NA coding upstream 310534 39501253 ~ 39503641 (+)
stac3 LOC106566701 coding downstream 32636 39849751 ~ 39855939 (+)
LOC110531167 LOC106571970 coding downstream 48768 39865883 ~ 39873666 (+)
LOC110532052 LOC106571959 coding downstream 122650 39939765 ~ 39946085 (+)
LOC110532054 NA coding downstream 144356 39961471 ~ 39962986 (+)
LOC110532055 gnas coding downstream 195981 40013096 ~ 40046553 (+)
G802820 NA non-coding upstream 25937 39787896 ~ 39788238 (+)
G802811 NA non-coding upstream 38476 39775467 ~ 39775699 (+)
G802778 NA non-coding upstream 97505 39716433 ~ 39716670 (+)
G802764 NA non-coding upstream 138826 39675013 ~ 39675349 (+)
G802399 NA non-coding upstream 251444 39558265 ~ 39562731 (+)
G802875 NA non-coding downstream 64079 39881194 ~ 39894131 (+)
G802900 NA non-coding downstream 100024 39917139 ~ 39949106 (+)
G802919 NA non-coding downstream 133686 39950801 ~ 39951044 (+)
G802920 NA non-coding downstream 134016 39951131 ~ 39951528 (+)
G802922 NA non-coding downstream 135307 39952422 ~ 39954470 (+)
G802830 LOC106571955 other upstream 2150 39810327 ~ 39812025 (+)
G802822 NA other upstream 21842 39791917 ~ 39792333 (+)
G802821 NA other upstream 23773 39789657 ~ 39790402 (+)
adcy6a LOC106566714 other upstream 340618 39465931 ~ 39513879 (+)
LOC110532068 LOC106571971 other downstream 569650 40375272 ~ 40393967 (+)
G803437 selenok other downstream 625781 40442896 ~ 40449939 (+)
G803457 NA other downstream 650513 40467628 ~ 40468002 (+)
G803728 NA other downstream 1203821 41020936 ~ 41021502 (+)
LOC110532096 LOC106572259 other downstream 1617769 41423598 ~ 41452922 (+)

Expression


Co-expression Network