G802920


Basic Information

Item Value
gene id G802920
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39951131 ~ 39951528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913675
taatctccctcgatctggggctccacgcaagatctcaccccgtggggtcaaaatgatcacaagaacggtgagcaaaaatcccagaaccacacgggggggacctagtgaatgacctgcagagagctgggaccaaagtaacaaagcctaccatcagcaagggcattgatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatatttggagggagttgaaagtccgtgttgcccagcaacagcctcaatacatcactgctctagaggagatctgcatggaggaatgggccaaaatacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913675 True 398 lncRNA 0.52 1 39951131 39951528

Neighbor

gene id symbol gene type direction distance location
LOC110532052 LOC106571959 coding upstream 5046 39939765 ~ 39946085 (+)
LOC110531167 LOC106571970 coding upstream 77465 39865883 ~ 39873666 (+)
stac3 LOC106566701 coding upstream 95192 39849751 ~ 39855939 (+)
map3k12 LOC106571953 coding upstream 204052 39730948 ~ 39747079 (+)
LOC110532038 LOC100286410 coding upstream 235245 39685828 ~ 39715886 (+)
LOC110532054 NA coding downstream 9943 39961471 ~ 39962986 (+)
LOC110532055 gnas coding downstream 61568 40013096 ~ 40046553 (+)
LOC110532057 LOC106571964 coding downstream 105280 40056808 ~ 40063855 (+)
LOC110532060 if2b coding downstream 124324 40075852 ~ 40085818 (+)
LOC110532058 LOC105026338 coding downstream 134483 40086011 ~ 40090648 (+)
G802919 NA non-coding upstream 87 39950801 ~ 39951044 (+)
G802900 NA non-coding upstream 2025 39917139 ~ 39949106 (+)
G802875 NA non-coding upstream 57000 39881194 ~ 39894131 (+)
G802831 NA non-coding upstream 134016 39814175 ~ 39817115 (+)
G802820 NA non-coding upstream 162893 39787896 ~ 39788238 (+)
G802922 NA non-coding downstream 894 39952422 ~ 39954470 (+)
G802925 NA non-coding downstream 9027 39960555 ~ 39960856 (+)
G802945 NA non-coding downstream 51270 40002798 ~ 40003013 (+)
G802947 NA non-coding downstream 53395 40004923 ~ 40005149 (+)
G802830 LOC106571955 other upstream 139106 39810327 ~ 39812025 (+)
G802822 NA other upstream 158798 39791917 ~ 39792333 (+)
G802821 NA other upstream 160729 39789657 ~ 39790402 (+)
spryd4 LOC106571951 other upstream 310262 39639241 ~ 39640889 (+)
adcy6a LOC106566714 other upstream 477574 39465931 ~ 39513879 (+)
LOC110532068 LOC106571971 other downstream 435237 40375272 ~ 40393967 (+)
G803437 selenok other downstream 491368 40442896 ~ 40449939 (+)
G803457 NA other downstream 516100 40467628 ~ 40468002 (+)
G803728 NA other downstream 1069408 41020936 ~ 41021502 (+)
LOC110532096 LOC106572259 other downstream 1483356 41423598 ~ 41452922 (+)

Expression


Co-expression Network