G802945


Basic Information

Item Value
gene id G802945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40002798 ~ 40003013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913700
gacatttcacatttaaaaaatgaagtggtgatcataactgacttaagacagggaatttgtactctgattaaatgtcaggaattatgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttcaaacttcactgtatatatacacctgttctgaaaggccccagaatctacaacaccactaagcaaggggcaccaccaagcaagcggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913700 True 216 lncRNA 0.38 1 40002798 40003013

Neighbor

gene id symbol gene type direction distance location
LOC110532054 NA coding upstream 39812 39961471 ~ 39962986 (+)
LOC110532052 LOC106571959 coding upstream 56713 39939765 ~ 39946085 (+)
LOC110531167 LOC106571970 coding upstream 129132 39865883 ~ 39873666 (+)
stac3 LOC106566701 coding upstream 146859 39849751 ~ 39855939 (+)
map3k12 LOC106571953 coding upstream 255719 39730948 ~ 39747079 (+)
LOC110532055 gnas coding downstream 10083 40013096 ~ 40046553 (+)
LOC110532057 LOC106571964 coding downstream 53795 40056808 ~ 40063855 (+)
LOC110532060 if2b coding downstream 72839 40075852 ~ 40085818 (+)
LOC110532058 LOC105026338 coding downstream 82998 40086011 ~ 40090648 (+)
LOC110532062 sfrs6 coding downstream 91669 40094682 ~ 40098605 (+)
G802925 NA non-coding upstream 41942 39960555 ~ 39960856 (+)
G802922 NA non-coding upstream 48328 39952422 ~ 39954470 (+)
G802920 NA non-coding upstream 51270 39951131 ~ 39951528 (+)
G802919 NA non-coding upstream 51754 39950801 ~ 39951044 (+)
G802947 NA non-coding downstream 1910 40004923 ~ 40005149 (+)
G802966 NA non-coding downstream 29349 40032362 ~ 40059387 (+)
G802967 NA non-coding downstream 29621 40032634 ~ 40059564 (+)
G802978 NA non-coding downstream 64899 40067912 ~ 40068425 (+)
G802981 NA non-coding downstream 68493 40071506 ~ 40071713 (+)
G802830 LOC106571955 other upstream 190773 39810327 ~ 39812025 (+)
G802822 NA other upstream 210465 39791917 ~ 39792333 (+)
G802821 NA other upstream 212396 39789657 ~ 39790402 (+)
spryd4 LOC106571951 other upstream 361929 39639241 ~ 39640889 (+)
adcy6a LOC106566714 other upstream 529241 39465931 ~ 39513879 (+)
LOC110532068 LOC106571971 other downstream 383752 40375272 ~ 40393967 (+)
G803437 selenok other downstream 439883 40442896 ~ 40449939 (+)
G803457 NA other downstream 464615 40467628 ~ 40468002 (+)
G803728 NA other downstream 1017923 41020936 ~ 41021502 (+)
LOC110532096 LOC106572259 other downstream 1431871 41423598 ~ 41452922 (+)

Expression


Co-expression Network