Gene
RNA
| Item | Value |
|---|---|
| gene id | G802967 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 40032634 ~ 40059564 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU913736 | True | 208 | lncRNA | 0.47 | 2 | 40032634 | 40059564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532054 | NA | coding | upstream | 69648 | 39961471 ~ 39962986 (+) |
| LOC110532052 | LOC106571959 | coding | upstream | 86549 | 39939765 ~ 39946085 (+) |
| LOC110531167 | LOC106571970 | coding | upstream | 158968 | 39865883 ~ 39873666 (+) |
| stac3 | LOC106566701 | coding | upstream | 176695 | 39849751 ~ 39855939 (+) |
| map3k12 | LOC106571953 | coding | upstream | 285555 | 39730948 ~ 39747079 (+) |
| LOC110532060 | if2b | coding | downstream | 16288 | 40075852 ~ 40085818 (+) |
| LOC110532058 | LOC105026338 | coding | downstream | 26447 | 40086011 ~ 40090648 (+) |
| LOC110532062 | sfrs6 | coding | downstream | 35118 | 40094682 ~ 40098605 (+) |
| LOC110532061 | LOC106571980 | coding | downstream | 39170 | 40098734 ~ 40109207 (+) |
| LOC110532064 | LOC106571978 | coding | downstream | 60917 | 40120481 ~ 40135587 (+) |
| G802947 | NA | non-coding | upstream | 27485 | 40004923 ~ 40005149 (+) |
| G802945 | NA | non-coding | upstream | 29621 | 40002798 ~ 40003013 (+) |
| G802925 | NA | non-coding | upstream | 71778 | 39960555 ~ 39960856 (+) |
| G802922 | NA | non-coding | upstream | 78164 | 39952422 ~ 39954470 (+) |
| G802978 | NA | non-coding | downstream | 8348 | 40067912 ~ 40068425 (+) |
| G802981 | NA | non-coding | downstream | 11942 | 40071506 ~ 40071713 (+) |
| G802996 | NA | non-coding | downstream | 55475 | 40115039 ~ 40115538 (+) |
| G802997 | NA | non-coding | downstream | 57057 | 40116621 ~ 40116975 (+) |
| G802998 | NA | non-coding | downstream | 58025 | 40117589 ~ 40117828 (+) |
| G802830 | LOC106571955 | other | upstream | 220609 | 39810327 ~ 39812025 (+) |
| G802822 | NA | other | upstream | 240301 | 39791917 ~ 39792333 (+) |
| G802821 | NA | other | upstream | 242232 | 39789657 ~ 39790402 (+) |
| spryd4 | LOC106571951 | other | upstream | 391765 | 39639241 ~ 39640889 (+) |
| adcy6a | LOC106566714 | other | upstream | 559077 | 39465931 ~ 39513879 (+) |
| LOC110532068 | LOC106571971 | other | downstream | 327201 | 40375272 ~ 40393967 (+) |
| G803437 | selenok | other | downstream | 383332 | 40442896 ~ 40449939 (+) |
| G803457 | NA | other | downstream | 408064 | 40467628 ~ 40468002 (+) |
| G803728 | NA | other | downstream | 961372 | 41020936 ~ 41021502 (+) |
| LOC110532096 | LOC106572259 | other | downstream | 1375320 | 41423598 ~ 41452922 (+) |
