G802996


Basic Information

Item Value
gene id G802996
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40115039 ~ 40115538 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913765
GGGGAAACCGAGTGCATTTTCATTCCTAGGAATGGTAGGTTCTGTCAGGTATCCAAGTATCTGCAAATAATGGGAAAGGGGGGGTTAGTACATTTAATACAACATATTGCATTATTCTTGCATTCCATAGGATCTTTAGGCATAGATCAACATTGTCAAATGTTGGCCGATGTAGTAACAGAAAATGAAAAtacaacacatctctctctctcacagatacacagacacacacacacaaacactgaccaaaaagttattttgttggcatttacgtatgtccccattaccagtaaaacataatcaaaaccaatttatttcacttacttgctgtgctgtttcgttgttcatttgttcagtctttTCATTCTCAAAGAGGATTTAATcgtacatgtcaagcagtgaagtctcagctctgtctgtccttgTGTTTAAAATGACCCACTATGACTCACTTCCTACCTGTTGCCACCTGTGTCAGATATACTGCTTTGGGCCAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913765 True 500 lncRNA 0.39 1 40115039 40115538

Neighbor

gene id symbol gene type direction distance location
LOC110532061 LOC106571980 coding upstream 5832 40098734 ~ 40109207 (+)
LOC110532062 sfrs6 coding upstream 16434 40094682 ~ 40098605 (+)
LOC110532058 LOC105026338 coding upstream 24391 40086011 ~ 40090648 (+)
LOC110532060 if2b coding upstream 29221 40075852 ~ 40085818 (+)
LOC110532057 LOC106571964 coding upstream 51184 40056808 ~ 40063855 (+)
LOC110532064 LOC106571978 coding downstream 4943 40120481 ~ 40135587 (+)
mybl2a NA coding downstream 37164 40152702 ~ 40164146 (+)
LOC110531171 LOC106571974 coding downstream 107652 40223190 ~ 40328855 (+)
LOC110532067 LOC106571972 coding downstream 243247 40358785 ~ 40371338 (+)
LOC110532068 LOC106571971 coding downstream 259734 40375272 ~ 40393967 (+)
G802981 NA non-coding upstream 43326 40071506 ~ 40071713 (+)
G802978 NA non-coding upstream 46614 40067912 ~ 40068425 (+)
G802967 NA non-coding upstream 55475 40032634 ~ 40059564 (+)
G802966 NA non-coding upstream 55652 40032362 ~ 40059387 (+)
G802947 NA non-coding upstream 109890 40004923 ~ 40005149 (+)
G802997 NA non-coding downstream 1083 40116621 ~ 40116975 (+)
G802998 NA non-coding downstream 2051 40117589 ~ 40117828 (+)
G803017 NA non-coding downstream 54744 40170282 ~ 40173004 (+)
G803026 LOC106566687 non-coding downstream 68503 40184041 ~ 40189878 (+)
G803324 NA non-coding downstream 89372 40204910 ~ 40205256 (+)
G802830 LOC106571955 other upstream 303014 39810327 ~ 39812025 (+)
G802822 NA other upstream 322706 39791917 ~ 39792333 (+)
G802821 NA other upstream 324637 39789657 ~ 39790402 (+)
spryd4 LOC106571951 other upstream 474170 39639241 ~ 39640889 (+)
adcy6a LOC106566714 other upstream 641482 39465931 ~ 39513879 (+)
G803437 selenok other downstream 327358 40442896 ~ 40449939 (+)
G803457 NA other downstream 352090 40467628 ~ 40468002 (+)
G803728 NA other downstream 905398 41020936 ~ 41021502 (+)
LOC110532096 LOC106572259 other downstream 1319346 41423598 ~ 41452922 (+)

Expression


Co-expression Network