G802997


Basic Information

Item Value
gene id G802997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40116621 ~ 40116975 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913766
ctattcctcTTAAGTTTTTCCTAAGAAAAAAGTTCAGAAGAAATATTAATATTTTAGGATTTCTTCTTGGAAATGTAGTTAACTTTAGGACAGCTAAACCCTTGTCTTGTGATGAatggatacttttgtaaccaCAAACGTTTTCTTGCCCCACTGCCACACAGACACatttgtctctggccccctcccagttagggggagtgatgagctctacagcagagtctcacaactcaatcgctggttgaaaactgttttctgcccctcccaaaagatacaatttgtagataattggccctctttctgggactcacccacaaacaggaccaagcctggcctgctgaggagtgacggactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913766 True 355 lncRNA 0.43 1 40116621 40116975

Neighbor

gene id symbol gene type direction distance location
LOC110532061 LOC106571980 coding upstream 7414 40098734 ~ 40109207 (+)
LOC110532062 sfrs6 coding upstream 18016 40094682 ~ 40098605 (+)
LOC110532058 LOC105026338 coding upstream 25973 40086011 ~ 40090648 (+)
LOC110532060 if2b coding upstream 30803 40075852 ~ 40085818 (+)
LOC110532057 LOC106571964 coding upstream 52766 40056808 ~ 40063855 (+)
LOC110532064 LOC106571978 coding downstream 3506 40120481 ~ 40135587 (+)
mybl2a NA coding downstream 35727 40152702 ~ 40164146 (+)
LOC110531171 LOC106571974 coding downstream 106215 40223190 ~ 40328855 (+)
LOC110532067 LOC106571972 coding downstream 241810 40358785 ~ 40371338 (+)
LOC110532068 LOC106571971 coding downstream 258297 40375272 ~ 40393967 (+)
G802996 NA non-coding upstream 1083 40115039 ~ 40115538 (+)
G802981 NA non-coding upstream 44908 40071506 ~ 40071713 (+)
G802978 NA non-coding upstream 48196 40067912 ~ 40068425 (+)
G802967 NA non-coding upstream 57057 40032634 ~ 40059564 (+)
G802966 NA non-coding upstream 57234 40032362 ~ 40059387 (+)
G802998 NA non-coding downstream 614 40117589 ~ 40117828 (+)
G803017 NA non-coding downstream 53307 40170282 ~ 40173004 (+)
G803026 LOC106566687 non-coding downstream 67066 40184041 ~ 40189878 (+)
G803324 NA non-coding downstream 87935 40204910 ~ 40205256 (+)
G803325 LOC106581475 non-coding downstream 88428 40205403 ~ 40205624 (+)
G802830 LOC106571955 other upstream 304596 39810327 ~ 39812025 (+)
G802822 NA other upstream 324288 39791917 ~ 39792333 (+)
G802821 NA other upstream 326219 39789657 ~ 39790402 (+)
spryd4 LOC106571951 other upstream 475752 39639241 ~ 39640889 (+)
adcy6a LOC106566714 other upstream 643064 39465931 ~ 39513879 (+)
G803437 selenok other downstream 325921 40442896 ~ 40449939 (+)
G803457 NA other downstream 350653 40467628 ~ 40468002 (+)
G803728 NA other downstream 903961 41020936 ~ 41021502 (+)
LOC110532096 LOC106572259 other downstream 1317909 41423598 ~ 41452922 (+)

Expression


Co-expression Network