G803576 (LOC106572275)


Basic Information

Item Value
gene id G803576
gene name LOC106572275
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40739758 ~ 40741509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU914437
CCTGTCCACTACAAAGAGgtcctgggagagagggagagatgggaaagtGAGATCATGGAGTACAAAGTTATTTGCGTCCGCTTGTGTGCATGTTTACACTATACCCTCCAGTTCCTCCGGGCGCTACTGAAGACCACTCTCTGGCTGTCTGACGCCCAGCAACGAGGTGGCAGAGCCTCATACAGCCCAGCAAACTCATCTTTCTTTGGCCTATTGACTACGTCCACCAGCAACGAGATACTCCTCATCTCCAGGTCATACTGCTGCATGGTGAGACACTGGCTGTGGGGGCCAAACACCTGTCCCTCCAGGTACACCAGGTAGCGTCCATCAGGGCTCAGACGGGGGGACGAGACGGAGCTGGTGTCCCCAGACAGACACTCACAGTTTCCTTCCAGGTCCAGACAAAACAGAGCTGACCTCCTATTGGAGCAGAACCTCAGGCCCAGTCTGAAGGGCTCATGCCACCAGCCcacaaaaaacacacactcaccatcATGGGCCCAGAGAGCCTGGCCTGGGGAAACATGTGAAGGGACACCCTGCAGCACTGTTACCGTGCCCTTGGCCACGTCGGCCACACACAGCACTGGGACACTTTTACTGGTCAAGCCTTCCCCC

Function

NR:

description
acylamino-acid-releasing enzyme-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU914437 True 621 lncRNA 0.56 6 40739758 40741509

Neighbor

gene id symbol gene type direction distance location
LOC110532072 LOC106572278 coding upstream 165502 40504652 ~ 40574256 (+)
LOC110532069 NA coding upstream 329361 40407812 ~ 40410397 (+)
LOC110532068 LOC106571971 coding upstream 345791 40375272 ~ 40393967 (+)
LOC110532067 LOC106571972 coding upstream 368420 40358785 ~ 40371338 (+)
LOC110531171 LOC106571974 coding upstream 410903 40223190 ~ 40328855 (+)
LOC110532075 NA coding downstream 24773 40766282 ~ 40768598 (+)
LOC110532080 LOC106572270 coding downstream 174601 40916110 ~ 40918983 (+)
si:dkey-72l14.3 LOC106572263 coding downstream 339943 41081452 ~ 41087171 (+)
LOC110531178 LOC106572259 coding downstream 511157 41252666 ~ 41363977 (+)
LOC110532096 LOC106572259 coding downstream 682089 41423598 ~ 41452922 (+)
G803571 LOC106572275 non-coding upstream 6475 40732554 ~ 40733283 (+)
G803566 NA non-coding upstream 19527 40720010 ~ 40720231 (+)
G803563 NA non-coding upstream 22152 40717352 ~ 40717606 (+)
G803542 NA non-coding upstream 71694 40667282 ~ 40668064 (+)
G803508 NA non-coding upstream 146279 40592542 ~ 40593479 (+)
G803583 NA non-coding downstream 3688 40745197 ~ 40745397 (+)
G803591 NA non-coding downstream 9846 40751355 ~ 40751820 (+)
G803592 NA non-coding downstream 18987 40760496 ~ 40761045 (+)
G803593 NA non-coding downstream 20472 40761981 ~ 40762289 (+)
G803595 LOC106586415 non-coding downstream 29978 40771487 ~ 40771980 (+)
G803457 NA other upstream 271756 40467628 ~ 40468002 (+)
G803437 selenok other upstream 289819 40442896 ~ 40449939 (+)
G802830 LOC106571955 other upstream 927733 39810327 ~ 39812025 (+)
G802822 NA other upstream 947425 39791917 ~ 39792333 (+)
G803728 NA other downstream 279427 41020936 ~ 41021502 (+)
LOC110532114 LOC106572334 other downstream 1280350 42021496 ~ 42027071 (+)
G805451 NA other downstream 1590584 42332093 ~ 42332438 (+)
G805600 NA other downstream 1604667 42346176 ~ 42348786 (+)

Expression


Co-expression Network