G804239


Basic Information

Item Value
gene id G804239
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40759647 ~ 40760196 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU915162
GACAGGACAGGGAAATCGCTGACTCGCTGACTGGTCCTCAAAAGCAGCGTAACGTGCTAGGTAAACCAAGAGACAAAGCAGGATGTCGCTTGAACAGGACTAGTGTGCAAAACTTATTTTCTCCTTTCTAATACCAATTAGACGTTGAATTTTAAGAAACGTGCATTTTGCAGGCTTCGTGACCCAATGACGTGTGTGTTACATAAATGTTCACTAATTACTAACCTAATATTATATATCAACAGGACCAAACTCTCCATATGATTCCAAATAGTGATATTATATGTCGTTAGGCTTGTACAGTGATCTTAGTTCCCAACAACATTCCCAACAAAGTGAAACTTAACAATACAATACATggtgtgtagtggagggtaagTGCAGCTCATCCCCTTTTTTTAACCTTCAACAAATGACCCACCTTTTACGGAGAAATTCGTCGAAAGTATAGAGACCTTTACTTTTTTCACAGGTGACCGGCTATCAGTTTTACACaactatatattttttcccaCTACTACATCACTGATGATATGCATTAACATGTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU915162 True 550 lncRNA 0.39 1 40759647 40760196

Neighbor

gene id symbol gene type direction distance location
LOC110532074 LOC106572274 coding downstream 631 40745623 ~ 40759016 (-)
zgc:136971 LOC106572275 coding downstream 15954 40731121 ~ 40743693 (-)
LOC110531175 sema3g coding downstream 100208 40592586 ~ 40659439 (-)
selenok selenok coding downstream 309629 40395732 ~ 40450018 (-)
LOC110531173 LOC106571982 coding downstream 324985 40423592 ~ 40434662 (-)
LOC118965936 NA coding upstream 356 40760552 ~ 40762438 (-)
prkar2aa LOC106572271 coding upstream 13969 40774165 ~ 40817548 (-)
mgll mgll coding upstream 83871 40844067 ~ 40866839 (-)
LOC110532083 NA coding upstream 116845 40877041 ~ 40878945 (-)
LOC110532079 LOC106572269 coding upstream 126282 40886478 ~ 40897584 (-)
G804241 NA non-coding downstream 71 40759344 ~ 40759576 (-)
G804237 NA non-coding downstream 14189 40745192 ~ 40745458 (-)
G804225 NA non-coding downstream 39225 40720215 ~ 40720422 (-)
G804154 NA non-coding downstream 175011 40584422 ~ 40584636 (-)
G804240 NA non-coding upstream 4421 40764617 ~ 40765378 (-)
G804245 NA non-coding upstream 6149 40766345 ~ 40766706 (-)
G804206 NA non-coding upstream 6913 40767109 ~ 40768584 (-)
G804273 NA non-coding upstream 27327 40787523 ~ 40787898 (-)
G804262 LOC106572270 non-coding upstream 157711 40917907 ~ 40918478 (-)
G804137 LOC106572278 other downstream 185697 40571014 ~ 40573950 (-)
LOC110531168 LOC106571968 other downstream 791673 39961467 ~ 39996984 (-)
G803170 LOC106571959 other downstream 810507 39944080 ~ 39949140 (-)
G802609 NA other downstream 1345321 39411342 ~ 39414326 (-)
G804307 NA other upstream 102393 40862589 ~ 40912358 (-)
wdr6 wdr6 other upstream 145176 40904738 ~ 40916073 (-)
G804255 NA other upstream 224286 40984482 ~ 40985245 (-)
G804543 LOC106572259 other upstream 676834 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 1367656 42125255 ~ 42141613 (-)

Expression


Co-expression Network