G803593


Basic Information

Item Value
gene id G803593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40761981 ~ 40762289 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU914456
ATCAAACATTCCTCCAGAAACTCTGGATCCACACCATGGCCAGCTGCTTTAAACTCTGCCAGTCTAGCTTACAGCAAGCACAGAAAGTCTCAGATAAAcgaaacacatacagacatgaCATATTATCAAACCATTACAAATCCATCCAAAACGTGGATGTCTGCGGACTACTGACCTTCATGTTGGCGGTGTCCTTGTCTGCACAGCCAGCGTTGGACACCACGTAGAGGTAGCCTTGGTCTGTCTTGGTGACGATGAGATCATCATTCATTCCTCCCTTGTAATTGGTGAAGAGGGTGAGCGTGCcct

Function

NR:

description
PREDICTED: aminomethyltransferase, mitochondrial isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU914456 True 309 lncRNA 0.47 1 40761981 40762289

Neighbor

gene id symbol gene type direction distance location
LOC110532072 LOC106572278 coding upstream 187725 40504652 ~ 40574256 (+)
LOC110532069 NA coding upstream 351584 40407812 ~ 40410397 (+)
LOC110532068 LOC106571971 coding upstream 368014 40375272 ~ 40393967 (+)
LOC110532067 LOC106571972 coding upstream 390643 40358785 ~ 40371338 (+)
LOC110531171 LOC106571974 coding upstream 433126 40223190 ~ 40328855 (+)
LOC110532075 NA coding downstream 3993 40766282 ~ 40768598 (+)
LOC110532080 LOC106572270 coding downstream 153821 40916110 ~ 40918983 (+)
si:dkey-72l14.3 LOC106572263 coding downstream 319163 41081452 ~ 41087171 (+)
LOC110531178 LOC106572259 coding downstream 490377 41252666 ~ 41363977 (+)
LOC110532096 LOC106572259 coding downstream 661309 41423598 ~ 41452922 (+)
G803592 NA non-coding upstream 936 40760496 ~ 40761045 (+)
G803591 NA non-coding upstream 10161 40751355 ~ 40751820 (+)
G803583 NA non-coding upstream 16584 40745197 ~ 40745397 (+)
G803576 LOC106572275 non-coding upstream 20472 40739758 ~ 40741509 (+)
G803571 LOC106572275 non-coding upstream 28698 40732554 ~ 40733283 (+)
G803595 LOC106586415 non-coding downstream 9198 40771487 ~ 40771980 (+)
G803589 LOC106572271 non-coding downstream 14352 40776641 ~ 40778842 (+)
G803586 LOC106572271 non-coding downstream 53712 40816001 ~ 40817492 (+)
G803629 NA non-coding downstream 102511 40864800 ~ 40866855 (+)
G803603 NA non-coding downstream 124189 40886478 ~ 40888179 (+)
G803457 NA other upstream 293979 40467628 ~ 40468002 (+)
G803437 selenok other upstream 312042 40442896 ~ 40449939 (+)
G802830 LOC106571955 other upstream 949956 39810327 ~ 39812025 (+)
G802822 NA other upstream 969648 39791917 ~ 39792333 (+)
G803728 NA other downstream 258647 41020936 ~ 41021502 (+)
LOC110532114 LOC106572334 other downstream 1259570 42021496 ~ 42027071 (+)
G805451 NA other downstream 1569804 42332093 ~ 42332438 (+)
G805600 NA other downstream 1583887 42346176 ~ 42348786 (+)

Expression


Co-expression Network