G804240



Basic Information


Item Value
gene id G804240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40764617 ~ 40765378 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU915163
CAAGTGTAGAAACAAATCATGTACGATCTTTCCTTGTTCATGACAGCAACATTTTAGTGTTGATACACAATCCCAGCCTGTGTAGTGTGTTTCCTCCAAATGTTTGAAGAATGTGTACCTTAATCAACTACATTTCCCAAAATTCCTTGGTCTGACCATGGTCGCTGTTTTGCAGAGAAAGCAGAATTCCGAGTACGGAGTCGAAAGAGTTGGCGACGGCGAGGTGTTTATGGAACGTGTTTTCGTCTGCAAGGAAGATACGATGTGAGCTCGGATGCTGTCTGGCGGCCGCGGGTTCGGATTCGGTTTCCGAGACCCGAGGGAGTGTCTACAGAGCGCTGGACTCGGATTAGCCGCGAGGCAGGAGAGGCATGCTTCAAATTCAGAGGTACTGTTCCATCAACCTGCAGGGCAAATGTATGCAGCTCACTAAAAGACACCCAAAACGTAACAATTCTAAAAGATTTGTATATGCAGTTGGCCTTGTGCTTGGAAATATGGTATATTCATTTGAACCTACTTTTGGATTATTTtttcaaatacagttgaagtcggaagtttacatacaccttagccaaatacatttcaactcagtttttcacaatttctgacatgtaatcctagtaaaaattccctgttttaggtcagttacgttcaccactttattttaagaatgtgaaatgtcagaataacagtagagagagtgattttatttcaacttttatttattttatcacattcccagtggatcagaagtttaca

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU915163 True 762 lncRNA 0.41 1 40764617 40765378

Neighbor


gene id symbol gene type direction distance location
LOC118965936 NA coding downstream 2179 40760552 ~ 40762438 (-)
LOC110532074 LOC106572274 coding downstream 5601 40745623 ~ 40759016 (-)
zgc:136971 LOC106572275 coding downstream 20924 40731121 ~ 40743693 (-)
LOC110531175 sema3g coding downstream 105178 40592586 ~ 40659439 (-)
selenok selenok coding downstream 314599 40395732 ~ 40450018 (-)
prkar2aa LOC106572271 coding upstream 8787 40774165 ~ 40817548 (-)
mgll mgll coding upstream 78689 40844067 ~ 40866839 (-)
LOC110532083 NA coding upstream 111663 40877041 ~ 40878945 (-)
LOC110532079 LOC106572269 coding upstream 121100 40886478 ~ 40897584 (-)
LOC118966048 LOC106572305 coding upstream 132646 40898024 ~ 40904180 (-)
G804239 NA non-coding downstream 4421 40759647 ~ 40760196 (-)
G804241 NA non-coding downstream 5041 40759344 ~ 40759576 (-)
G804237 NA non-coding downstream 19159 40745192 ~ 40745458 (-)
G804225 NA non-coding downstream 44195 40720215 ~ 40720422 (-)
G804245 NA non-coding upstream 967 40766345 ~ 40766706 (-)
G804206 NA non-coding upstream 1731 40767109 ~ 40768584 (-)
G804273 NA non-coding upstream 22145 40787523 ~ 40787898 (-)
G804262 LOC106572270 non-coding upstream 152529 40917907 ~ 40918478 (-)
LOC110531177 celsr3 non-coding upstream 153402 40918726 ~ 40972151 (-)
G804137 LOC106572278 other downstream 190667 40571014 ~ 40573950 (-)
LOC110531168 LOC106571968 other downstream 796643 39961467 ~ 39996984 (-)
G803170 LOC106571959 other downstream 815477 39944080 ~ 39949140 (-)
G802609 NA other downstream 1350291 39411342 ~ 39414326 (-)
G804307 NA other upstream 97211 40862589 ~ 40912358 (-)
wdr6 wdr6 other upstream 139994 40904738 ~ 40916073 (-)
G804255 NA other upstream 219104 40984482 ~ 40985245 (-)
G804543 LOC106572259 other upstream 671652 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 1362474 42125255 ~ 42141613 (-)

Expression



Co-expression Network