G804273


Basic Information

Item Value
gene id G804273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40787523 ~ 40787898 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU915201
CCAGGTGTCATCTCAGTAGGTGTTCCAGGTATCATCTCAGTAGGTGTTCCAGGTATCCTCATGGGCAGGGTAGGAAATGAACTAGGCACCGTGGcaggtagaaagaaagaaaaaaatgcaCAAAAAAATCACTAAAGGATGAGAATGCTTTGTAATATTGCTAGTAAGAAGTAGTAATGTGGTTTCTTGCTCAACTTCATTTTTGGGACCTGAATATGTCAAACGAAATAATTTAGGTACAATAGTAAAAACAGAAACAGTTCTACAAATGAGCATCAAGAAACGATAAGGTACCGACCCTTTTATGAGCACAATGGAAGTATTTGGG
>TU915202
CCAGGTGTCATCTCAGTAGGTGTTCCAGGTATCATCTCAGTAGGTGTTCCAGGTATCATCTCAGTAGGTGTTCCAGGTATCCTCATGGGCAGGGTAGGAAATGAACTAGGCACCGTGGcaggtagaaagaaagaaaaaaatgcaCAAAAAAATCACTAAAGGATGAGAATGCTTTGTAATATTGCTAGTAAGAAGTAGTAATGTGGTTTCTTGCTCAACTTCATTTTTGGGACCTGAATATGTCAAACGAAATAATTTAGGTACAATAGTAAAAACAGAAACAGTTCTACAAATGAGCATCAAGAAACGATAAGGTACCGACCCTTTTATGAGCACAATGGAAGTATTTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU915201 False 328 lncRNA 0.39 2 40787523 40787898
TU915202 True 352 lncRNA 0.39 2 40787523 40787898

Neighbor

gene id symbol gene type direction distance location
LOC118965936 NA coding downstream 25085 40760552 ~ 40762438 (-)
LOC110532074 LOC106572274 coding downstream 28507 40745623 ~ 40759016 (-)
zgc:136971 LOC106572275 coding downstream 43830 40731121 ~ 40743693 (-)
LOC110531175 sema3g coding downstream 128084 40592586 ~ 40659439 (-)
selenok selenok coding downstream 337505 40395732 ~ 40450018 (-)
mgll mgll coding upstream 56169 40844067 ~ 40866839 (-)
LOC110532083 NA coding upstream 89143 40877041 ~ 40878945 (-)
LOC110532079 LOC106572269 coding upstream 98580 40886478 ~ 40897584 (-)
LOC118966048 LOC106572305 coding upstream 110126 40898024 ~ 40904180 (-)
wdr6 wdr6 coding upstream 116840 40904738 ~ 40916073 (-)
G804206 NA non-coding downstream 18939 40767109 ~ 40768584 (-)
G804245 NA non-coding downstream 20817 40766345 ~ 40766706 (-)
G804240 NA non-coding downstream 22145 40764617 ~ 40765378 (-)
G804239 NA non-coding downstream 27327 40759647 ~ 40760196 (-)
G804241 NA non-coding downstream 27947 40759344 ~ 40759576 (-)
G804262 LOC106572270 non-coding upstream 130009 40917907 ~ 40918478 (-)
LOC110531177 celsr3 non-coding upstream 130882 40918726 ~ 40972151 (-)
G804247 NA non-coding upstream 195506 40983404 ~ 40984266 (-)
G804259 NA non-coding upstream 220991 41008889 ~ 41009137 (-)
G804269 NA non-coding upstream 222153 41010051 ~ 41010825 (-)
G804137 LOC106572278 other downstream 213573 40571014 ~ 40573950 (-)
LOC110531168 LOC106571968 other downstream 819549 39961467 ~ 39996984 (-)
G803170 LOC106571959 other downstream 838383 39944080 ~ 39949140 (-)
G802609 NA other downstream 1373197 39411342 ~ 39414326 (-)
G804307 NA other upstream 74691 40862589 ~ 40912358 (-)
G804255 NA other upstream 196584 40984482 ~ 40985245 (-)
G804543 LOC106572259 other upstream 649132 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 1339954 42125255 ~ 42141613 (-)

Expression


Co-expression Network