G804262 (LOC106572270)



Basic Information


Item Value
gene id G804262
gene name LOC106572270
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40917907 ~ 40918478 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU915189
aaaaaaataatcttcaTAAAAAcataaaagcaacaaaataaccgTCAAATTATTTGATCATCAGTGTCCTCGCTACTCGAGCACGGTCGTACCTCTTCCCCCATCTTCTTCAGCTTAGCCTGGTAGTATCTCTTTTTTAGCCTGTAGGCTTTCTCTTTCTGCCTCACCGCCTTCCTCTTGTCTTCTaaaacattctgttccatctgtAGGACTCTCATCCTCTGCTCATGTTCCAACTCCGACAGTTCCAGCATGCGCGGCCCGTACCGTGGGTCCTCGGACCCCCGCCCTGCTGCCGCTGCCAGAGAGGTGAGGGGTTGCGGGGCGGCCCGGGGGACGTAGGGCAGGTCAAAGTTCACGGGGCAAGAGGTGAACAGGCTGGAGGATGAGGCAGATGGGATGGGCGGAGGGAGGAAGGACGGGGATGTCCCAGACCAGGAGGTTTCACTGTGAGTGAGAGTGGAGGCGTTGGGCTGGCTGGTGGAGAAGGGGATCCGGAGGGGTCCGTCACTTCCTGCTAGTGCTGTGAAGGAGGCGATGCCGATGCTCATGGCTACCTGGTCTTTACTCTC

Function


NR:

description
uncharacterized protein LOC110532080

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU915189 True 572 lncRNA 0.55 1 40917907 40918478

Neighbor


gene id symbol gene type direction distance location
wdr6 wdr6 coding downstream 1834 40904738 ~ 40916073 (-)
LOC118966048 LOC106572305 coding downstream 13727 40898024 ~ 40904180 (-)
LOC110532079 LOC106572269 coding downstream 20323 40886478 ~ 40897584 (-)
LOC110532083 NA coding downstream 38962 40877041 ~ 40878945 (-)
mgll mgll coding downstream 51068 40844067 ~ 40866839 (-)
LOC110531177 celsr3 coding upstream 248 40918726 ~ 40972151 (-)
dalrd3 dalrd3 coding upstream 66991 40985469 ~ 41000703 (-)
impdh2 LOC106566785 coding upstream 94901 41013379 ~ 41024793 (-)
arih2 arih2 coding upstream 107772 41026250 ~ 41034402 (-)
xpc xpc coding upstream 122821 41041299 ~ 41053107 (-)
G804273 NA non-coding downstream 130009 40787523 ~ 40787898 (-)
G804206 NA non-coding downstream 149323 40767109 ~ 40768584 (-)
G804245 NA non-coding downstream 151201 40766345 ~ 40766706 (-)
G804240 NA non-coding downstream 152529 40764617 ~ 40765378 (-)
G804239 NA non-coding downstream 157711 40759647 ~ 40760196 (-)
G804247 NA non-coding upstream 64926 40983404 ~ 40984266 (-)
G804259 NA non-coding upstream 90411 41008889 ~ 41009137 (-)
G804269 NA non-coding upstream 91573 41010051 ~ 41010825 (-)
G804353 NA non-coding upstream 117094 41035572 ~ 41035777 (-)
G804307 NA other downstream 5549 40862589 ~ 40912358 (-)
G804137 LOC106572278 other downstream 343957 40571014 ~ 40573950 (-)
selenok selenok other downstream 467967 40395732 ~ 40450018 (-)
LOC110531168 LOC106571968 other downstream 949933 39961467 ~ 39996984 (-)
G804255 NA other upstream 66004 40984482 ~ 40985245 (-)
G804543 LOC106572259 other upstream 518552 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 1209374 42125255 ~ 42141613 (-)
G806724 LOC106572208 other upstream 2413452 43331930 ~ 43339589 (-)
prdm16 prdm16 other upstream 3022088 43781726 ~ 44015554 (-)

Expression



Co-expression Network