G804247


Basic Information

Item Value
gene id G804247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40983404 ~ 40984266 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU915173
tactttcgcaaggcactgtatatatatattgtggtaaactgtggggtgttgggttgagcgtgcagagattgacacagagacagggggggCTTTAGTCCGCAAAAACAAATATATCAAAGAAATTGCTCggtcttccttctctctcttaaccggtgtccgtctctctcccgcCATGTGCCACCGtgctcctttaaaaaaaataaatgtatccgttattttactgagaacacgttctcatttgcagcaacaacctggggaatagttacaggggagaggagggggacgaatgagccaattgtaaactggggattattaggtgaccgtgatggttggagggccagattgggaatttagccaggacaacggggttaacacccctactcttacgataagtgccatgggatatttaatgacctcagagagtcaggaccccCGTTTAACGTCCAATCCAAAAgactgcaccctacacagggcagtgtcaatcactgccctggggcattgggatattttgtttttagaccagaggaaagagtgcctcacGTACCTCCCCTCTATTACCATCCCCCGGGTAGACCTCCTGGGATACCACAATATATATATGGAATGATACATGTGACATAGACTAACCCACCACCACCAATGTACTTCTGTTGTGCCAAAGTACTATACAGTACTGTCCCAGATCCCAGTTCTCCATTGTCGCTCTGTGCCATATCTTGGACTGTTGTTATTGTGTAcgtttcttgtggtttttatggtgACCCGAGCTTTACACggactctcactctctcccacaaTGTTGTCAACTGTGCATTGGGCCAATATATTTTCCACCTAGATCAATAAATGAGTGTTGAACTCGG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU915173 True 863 lncRNA 0.46 1 40983404 40984266

Neighbor

gene id symbol gene type direction distance location
LOC110531177 celsr3 coding downstream 11253 40918726 ~ 40972151 (-)
wdr6 wdr6 coding downstream 67331 40904738 ~ 40916073 (-)
LOC118966048 LOC106572305 coding downstream 79224 40898024 ~ 40904180 (-)
LOC110532079 LOC106572269 coding downstream 85820 40886478 ~ 40897584 (-)
LOC110532083 NA coding downstream 104459 40877041 ~ 40878945 (-)
dalrd3 dalrd3 coding upstream 1203 40985469 ~ 41000703 (-)
impdh2 LOC106566785 coding upstream 29113 41013379 ~ 41024793 (-)
arih2 arih2 coding upstream 41984 41026250 ~ 41034402 (-)
xpc xpc coding upstream 57033 41041299 ~ 41053107 (-)
borcs6 LOC106572262 coding upstream 104752 41089018 ~ 41095989 (-)
G804262 LOC106572270 non-coding downstream 64926 40917907 ~ 40918478 (-)
G804273 NA non-coding downstream 195506 40787523 ~ 40787898 (-)
G804206 NA non-coding downstream 214820 40767109 ~ 40768584 (-)
G804245 NA non-coding downstream 216698 40766345 ~ 40766706 (-)
G804259 NA non-coding upstream 24623 41008889 ~ 41009137 (-)
G804269 NA non-coding upstream 25785 41010051 ~ 41010825 (-)
G804353 NA non-coding upstream 51306 41035572 ~ 41035777 (-)
G804354 NA non-coding upstream 51554 41035820 ~ 41036083 (-)
G804355 NA non-coding upstream 52798 41037064 ~ 41037539 (-)
G804307 NA other downstream 71046 40862589 ~ 40912358 (-)
G804137 LOC106572278 other downstream 409454 40571014 ~ 40573950 (-)
selenok selenok other downstream 533464 40395732 ~ 40450018 (-)
LOC110531168 LOC106571968 other downstream 1015430 39961467 ~ 39996984 (-)
G804255 NA other upstream 216 40984482 ~ 40985245 (-)
G804543 LOC106572259 other upstream 452764 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 1143586 42125255 ~ 42141613 (-)
G806724 LOC106572208 other upstream 2347664 43331930 ~ 43339589 (-)
prdm16 prdm16 other upstream 2956300 43781726 ~ 44015554 (-)

Expression


Co-expression Network