Item | Value |
---|---|
gene id | XLOC_027126 |
gene name | NA |
gene type | non-coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007115.7 |
NCBI id | CM002888.2 |
chromosome length | 78093715 |
location | 9623291 ~ 9634704 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
id | name | namespace |
---|---|---|
GO:0009260 | ribonucleotide biosynthetic process | biological_process |
GO:0046031 | ADP metabolic process | biological_process |
GO:0006096 | glycolytic process | biological_process |
GO:0051186 | obsolete cofactor metabolic process | biological_process |
GO:0051188 | obsolete cofactor biosynthetic process | biological_process |
GO:1901575 | organic substance catabolic process | biological_process |
GO:0009108 | obsolete coenzyme biosynthetic process | biological_process |
GO:0006164 | purine nucleotide biosynthetic process | biological_process |
GO:0006732 | obsolete coenzyme metabolic process | biological_process |
GO:0046390 | ribose phosphate biosynthetic process | biological_process |
GO:0019637 | organophosphate metabolic process | biological_process |
GO:0009135 | purine nucleoside diphosphate metabolic process | biological_process |
GO:0006757 | ATP generation from ADP | biological_process |
GO:0009152 | purine ribonucleotide biosynthetic process | biological_process |
GO:0042866 | pyruvate biosynthetic process | biological_process |
GO:0072522 | purine-containing compound biosynthetic process | biological_process |
GO:0072524 | pyridine-containing compound metabolic process | biological_process |
GO:0072525 | pyridine-containing compound biosynthetic process | biological_process |
GO:0009165 | nucleotide biosynthetic process | biological_process |
GO:0009179 | purine ribonucleoside diphosphate metabolic process | biological_process |
GO:0009185 | ribonucleoside diphosphate metabolic process | biological_process |
GO:0004361 | glutaryl-CoA dehydrogenase activity | molecular_function |
ensembl_id | ENSDARG00000109844 ENSDARG00000110426 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00057619 | False | 4062 | lncRNA | 0.35 | 1 | 9623291 | 9627352 |
TCONS_00053458 | False | 784 | lncRNA | 0.42 | 4 | 9623455 | 9627352 |
TCONS_00053459 | False | 1177 | lncRNA | 0.38 | 3 | 9623461 | 9627352 |
TCONS_00057620 | False | 1218 | lncRNA | 0.38 | 3 | 9623482 | 9627352 |
TCONS_00057621 | False | 1212 | lncRNA | 0.38 | 3 | 9623488 | 9634704 |
TCONS_00057622 | False | 3762 | lncRNA | 0.35 | 1 | 9630943 | 9634704 |
TCONS_00053460 | False | 784 | lncRNA | 0.42 | 4 | 9630952 | 9634704 |
TCONS_00053461 | False | 1177 | lncRNA | 0.38 | 3 | 9630958 | 9634704 |
TCONS_00057623 | True | 1218 | lncRNA | 0.38 | 3 | 9630979 | 9634704 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_027125 | tmem243b | coding | upstream | 3734 | 9612574 ~ 9619557 (+) |
XLOC_027124 | meig1 | coding | upstream | 11416 | 9609905 ~ 9611875 (+) |
XLOC_027123 | hspa14 | coding | upstream | 21600 | 9592486 ~ 9601691 (+) |
XLOC_027122 | lsm8 | coding | upstream | 83867 | 9536860 ~ 9539424 (+) |
XLOC_027121 | kitlgb | coding | upstream | 107893 | 9508505 ~ 9515398 (+) |
XLOC_027127 | ELAPOR2 | coding | downstream | 35013 | 9669717 ~ 9690419 (+) |
XLOC_027128 | BX901962.4 | coding | downstream | 45136 | 9679840 ~ 9724792 (+) |
XLOC_027129 | NA | coding | downstream | 92091 | 9726795 ~ 9730672 (+) |
XLOC_027130 | hsp90b1 | coding | downstream | 201761 | 9836465 ~ 9843836 (+) |
XLOC_027131 | NA | coding | downstream | 233206 | 9867910 ~ 9889097 (+) |
XLOC_027116 | NA | non-coding | upstream | 270659 | 9346919 ~ 9352632 (+) |
XLOC_027115 | NA | non-coding | upstream | 276588 | 9340827 ~ 9346703 (+) |
XLOC_027113 | NA | non-coding | upstream | 420223 | 9197350 ~ 9203068 (+) |
XLOC_027111 | NA | non-coding | upstream | 474337 | 9107259 ~ 9148954 (+) |
XLOC_027107 | NA | non-coding | upstream | 737568 | 8874565 ~ 8885723 (+) |
XLOC_027135 | NA | non-coding | downstream | 423397 | 10058101 ~ 10061448 (+) |
XLOC_027141 | NA | non-coding | downstream | 1080041 | 10714745 ~ 10715592 (+) |
XLOC_027143 | NA | non-coding | downstream | 1129573 | 10764277 ~ 10791239 (+) |