G804565


Basic Information

Item Value
gene id G804565
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 41462677 ~ 41463105 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU915537
acttttgcaaggcactgtatgccattggatgaggtaatggtttggtactatgttgtaccaagaacgagaagaACTTCGTTTAGGAGACCAAATTGAATGATCATTTatatctggctatgggatactccgcTTTCAAGTAAAAGGCACTTTGTGAAGTTCCTATtatctgtggtttgtcatgtcggctagggggtggatctttgcaATAAAAGATTGCCATTTTGTAAACACTCTTTGatctgaattgatctgagagtcaaaaagggctatggtgaagctcatttaattaaagatggactttata
>TU915540
atgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaattaagttttatatatttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggtcgaatacttttgcaaggcactgtatgccattggatgaggtaatggtttggtactatgttgtaccaagaacgagaagaACTTCGTTTAGGAGACCAAATTGAATGATCATTTatatctggctatgggatactccgcTTTCAAGTAAAAGGCACTTTGTGAAGTTCCTATtatctgtggtttgtcatgtcggctagggggtggatctttgcaATAAAAGATTGCCATTTTGTAAACACTCTTTGatctgaattgatctgagagtcaaaaagggctatggtgaagctcatttaattaaagatggactttata
>TU915542
tggtactatgttgtaccaagaacgagaagaACTTCGTTTAGGAGACCAAATTGAATGATCATTTatatctggctatgggatactccgcTTTCAAGTAAAAGGCACTTTGTGAAGTTCCTATtatctgtggtttgtcatgtcggctagggggtggatctttgcaATAAAAGATTGCCATTTTGTAAACACTCTTTGatctgaattgatctgagagtcaaaaagggctatggtgaagctcatttaattaaagatggactttata

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU915537 False 304 lncRNA 0.38 1 41462677 41462980
TU915540 False 429 lncRNA 0.38 1 41462677 41463105
TU915542 True 262 lncRNA 0.37 1 41462677 41462938

Neighbor

gene id symbol gene type direction distance location
LOC110532095 LOC106572303 coding downstream 225424 41167228 ~ 41237253 (-)
tmem115 LOC106572260 coding downstream 298148 41158079 ~ 41164529 (-)
rhoab LOC106572261 coding downstream 314947 41141767 ~ 41147730 (-)
sema3h LOC106572304 coding downstream 335306 41098740 ~ 41127371 (-)
borcs6 LOC106572262 coding downstream 366688 41089018 ~ 41095989 (-)
LOC110532099 LOC106572257 coding upstream 1554 41464659 ~ 41491370 (-)
LOC110532102 LOC106572255 coding upstream 180077 41643182 ~ 41665512 (-)
LOC110532103 mapre1 coding upstream 209582 41672687 ~ 41681390 (-)
LOC110532104 LOC106572254 coding upstream 230817 41693922 ~ 41756792 (-)
LOC110532110 NA coding upstream 492070 41955175 ~ 41968953 (-)
G804556 NA non-coding downstream 5035 41457236 ~ 41457642 (-)
G804549 NA non-coding downstream 16766 41445709 ~ 41445911 (-)
G804548 NA non-coding downstream 17040 41445432 ~ 41445637 (-)
G804470 NA non-coding downstream 92307 41295949 ~ 41370370 (-)
G804425 NA non-coding downstream 275152 41187282 ~ 41187525 (-)
G804733 NA non-coding upstream 124632 41587737 ~ 41587961 (-)
G804744 NA non-coding upstream 150691 41613796 ~ 41614063 (-)
G804752 NA non-coding upstream 159803 41622908 ~ 41623437 (-)
G804757 NA non-coding upstream 163449 41626554 ~ 41626914 (-)
G804885 NA non-coding upstream 230404 41693509 ~ 41693835 (-)
G804543 LOC106572259 other downstream 24706 41437030 ~ 41437971 (-)
G804255 NA other downstream 477432 40984482 ~ 40985245 (-)
wdr6 wdr6 other downstream 546703 40904738 ~ 40916073 (-)
G804307 NA other downstream 550319 40862589 ~ 40912358 (-)
G804137 LOC106572278 other downstream 888727 40571014 ~ 40573950 (-)
LOC110532119 LOC106572245 other upstream 664747 42125255 ~ 42141613 (-)
G806724 LOC106572208 other upstream 1868825 43331930 ~ 43339589 (-)
prdm16 prdm16 other upstream 2477461 43781726 ~ 44015554 (-)
tafa5l LOC106572193 other upstream 2785693 44247091 ~ 44292397 (-)
G807941 NA other upstream 2898311 44361416 ~ 44362166 (-)

Expression


Co-expression Network