G804855


Basic Information

Item Value
gene id G804855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 41780833 ~ 41781841 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU915862
CACCACCAGCCACACATGTTGATGATCATGAGAGAAAGAATATCAAAGCCTGATTTATTCATTTATTAAAGGGAATTGAGGTGCCTTGCAATGGGAGGCTGACGTGAACACACATACTGTTGTTACTCTCTGTGAATACCAAAAGCACCGGCTGAATACTTAGCCAGTGATTTTCACTAAACAGGAGGGCTGAAGCAGGAGGGGAGTATATCTATTAACTTATTGAAGACAACGAGATGCCGAGGACCAAAGTGtgttttagagaatttggcagtacatccagccggcttcacaactgcagaccacgtgtaaccacaccagcccag

Function

NR:

description
PREDICTED: uncharacterized protein LOC102290911

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU915862 True 326 lncRNA 0.45 2 41780833 41781841

Neighbor

gene id symbol gene type direction distance location
LOC110531179 commd7 coding upstream 24856 41744404 ~ 41755977 (+)
soga1 LOC106572256 coding upstream 206890 41498311 ~ 41573943 (+)
LOC110532096 LOC106572259 coding upstream 327911 41423598 ~ 41452922 (+)
LOC110531178 LOC106572259 coding upstream 416856 41252666 ~ 41363977 (+)
si:dkey-72l14.3 LOC106572263 coding upstream 693662 41081452 ~ 41087171 (+)
LOC110532105 LOC106572251 coding downstream 24132 41805973 ~ 41935192 (+)
LOC110532108 LOC106572252 coding downstream 153749 41935590 ~ 41957365 (+)
LOC110532106 LOC106572250 coding downstream 185897 41967738 ~ 42001368 (+)
LOC110532114 LOC106572334 coding downstream 239655 42021496 ~ 42027071 (+)
LOC110532112 LOC106572249 coding downstream 259877 42041718 ~ 42060595 (+)
G804829 NA non-coding upstream 33635 41746910 ~ 41747198 (+)
G804798 LOC106572254 non-coding upstream 68826 41711527 ~ 41712007 (+)
G804792 NA non-coding upstream 83259 41697194 ~ 41697574 (+)
G804783 mapre1 non-coding upstream 99504 41672828 ~ 41681329 (+)
G804765 NA non-coding upstream 146896 41633701 ~ 41633937 (+)
G804948 NA non-coding downstream 12021 41793862 ~ 41794080 (+)
G805065 NA non-coding downstream 183700 41965541 ~ 41965763 (+)
G805081 NA non-coding downstream 253398 42035239 ~ 42035447 (+)
G805083 NA non-coding downstream 255246 42037087 ~ 42037287 (+)
G805303 NA non-coding downstream 306897 42088738 ~ 42088942 (+)
G803728 NA other upstream 759331 41020936 ~ 41021502 (+)
G803457 NA other upstream 1312831 40467628 ~ 40468002 (+)
G803437 selenok other upstream 1330894 40442896 ~ 40449939 (+)
LOC110532068 LOC106571971 other upstream 1391781 40375272 ~ 40393967 (+)
G805451 NA other downstream 550252 42332093 ~ 42332438 (+)
G805600 NA other downstream 564335 42346176 ~ 42348786 (+)
G807677 NA other downstream 2413874 44195715 ~ 44196041 (+)
G807841 NA other downstream 2660821 44442662 ~ 44453077 (+)

Expression


Co-expression Network