Gene
RNA
| Item | Value |
|---|---|
| gene id | G805256 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 42039116 ~ 42039543 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU916293 | True | 428 | lncRNA | 0.43 | 1 | 42039116 | 42039543 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532109 | NA | coding | downstream | 44605 | 41992351 ~ 41994511 (-) |
| LOC110532110 | NA | coding | downstream | 70163 | 41955175 ~ 41968953 (-) |
| LOC110532104 | LOC106572254 | coding | downstream | 282324 | 41693922 ~ 41756792 (-) |
| LOC110532103 | mapre1 | coding | downstream | 357726 | 41672687 ~ 41681390 (-) |
| LOC110532102 | LOC106572255 | coding | downstream | 373604 | 41643182 ~ 41665512 (-) |
| LOC110532116 | LOC106572333 | coding | upstream | 36034 | 42075577 ~ 42076849 (-) |
| LOC110533012 | LOC106572332 | coding | upstream | 45788 | 42085331 ~ 42087302 (-) |
| rnf207b | LOC106572244 | coding | upstream | 58727 | 42098270 ~ 42114365 (-) |
| LOC110532119 | LOC106572245 | coding | upstream | 85712 | 42125255 ~ 42141613 (-) |
| LOC110532120 | LOC106572241 | coding | upstream | 115542 | 42155085 ~ 42160574 (-) |
| G805254 | NA | non-coding | downstream | 2105 | 42036802 ~ 42037011 (-) |
| G805253 | LOC107745311 | non-coding | downstream | 2746 | 42035895 ~ 42036370 (-) |
| G805246 | NA | non-coding | downstream | 12081 | 42025273 ~ 42027035 (-) |
| G805160 | NA | non-coding | downstream | 35273 | 42000160 ~ 42003843 (-) |
| G805210 | NA | non-coding | downstream | 71754 | 41967160 ~ 41967362 (-) |
| G805464 | NA | non-coding | upstream | 77962 | 42117505 ~ 42117752 (-) |
| G805467 | LOC102779685 | non-coding | upstream | 78972 | 42118515 ~ 42125165 (-) |
| G805481 | NA | non-coding | upstream | 104994 | 42144537 ~ 42144786 (-) |
| G805482 | NA | non-coding | upstream | 105535 | 42145078 ~ 42145395 (-) |
| G804543 | LOC106572259 | other | downstream | 601145 | 41437030 ~ 41437971 (-) |
| G804255 | NA | other | downstream | 1053871 | 40984482 ~ 40985245 (-) |
| wdr6 | wdr6 | other | downstream | 1123142 | 40904738 ~ 40916073 (-) |
| G804307 | NA | other | downstream | 1126758 | 40862589 ~ 40912358 (-) |
| G804137 | LOC106572278 | other | downstream | 1465166 | 40571014 ~ 40573950 (-) |
| G806724 | LOC106572208 | other | upstream | 1292387 | 43331930 ~ 43339589 (-) |
| prdm16 | prdm16 | other | upstream | 1901023 | 43781726 ~ 44015554 (-) |
| tafa5l | LOC106572193 | other | upstream | 2209255 | 44247091 ~ 44292397 (-) |
| G807941 | NA | other | upstream | 2321873 | 44361416 ~ 44362166 (-) |
