G805344


Basic Information

Item Value
gene id G805344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 42151295 ~ 42151539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU916383
AATTCGAGATTATTTAGGCTAGAGCCAAAGATGAAAGGGGAAATCTTATACTTATTGCCAATTGTCAGTGAATTACATACGTTGAAAGTGTTCATTTCAACAGCCTGACCCTGCCACTTTGTTTACTAAGCTACTAAATTTAGGATGAGGTTTAGGTAACCACTCTAAAATTCATAATGCCTGAAGGTCAATTAGACTGACATGATCGTTGGAAACATATTTGGAGCTATACATTGTAGATAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU916383 True 245 lncRNA 0.36 1 42151295 42151539

Neighbor

gene id symbol gene type direction distance location
LOC110532121 LOC106572248 coding upstream 26426 42118391 ~ 42124869 (+)
LOC110532118 LOC106566808 coding upstream 51346 42094188 ~ 42099949 (+)
LOC110531180 LOC106572301 coding upstream 76953 42065184 ~ 42074342 (+)
LOC110532112 LOC106572249 coding upstream 90700 42041718 ~ 42060595 (+)
LOC110532114 LOC106572334 coding upstream 124224 42021496 ~ 42027071 (+)
LOC118966050 NA coding downstream 8873 42160412 ~ 42179321 (+)
LOC110532122 LOC106572240 coding downstream 58296 42209835 ~ 42236639 (+)
LOC110532123 LOC106572239 coding downstream 85805 42237344 ~ 42246426 (+)
LOC110532129 LOC106572329 coding downstream 273543 42425082 ~ 42431053 (+)
glut1b LOC106572233 coding downstream 365607 42496861 ~ 42529048 (+)
G805340 NA non-coding upstream 4620 42146468 ~ 42146675 (+)
G805339 NA non-coding upstream 5378 42145622 ~ 42145917 (+)
G805336 NA non-coding upstream 9422 42141437 ~ 42141873 (+)
G805324 NA non-coding upstream 23769 42127015 ~ 42127526 (+)
G805315 LOC106572244 non-coding upstream 37348 42107824 ~ 42113947 (+)
G805348 NA non-coding downstream 2752 42154291 ~ 42154499 (+)
G805323 rcc2 non-coding downstream 5988 42157527 ~ 42218067 (+)
G805422 NA non-coding downstream 137751 42289290 ~ 42289548 (+)
G805423 NA non-coding downstream 138015 42289554 ~ 42291000 (+)
G805601 NA non-coding downstream 194062 42345601 ~ 42345839 (+)
LOC110532096 LOC106572259 other upstream 715872 41423598 ~ 41452922 (+)
G803728 NA other upstream 1129793 41020936 ~ 41021502 (+)
G803457 NA other upstream 1683293 40467628 ~ 40468002 (+)
G803437 selenok other upstream 1701356 40442896 ~ 40449939 (+)
G805451 NA other downstream 180554 42332093 ~ 42332438 (+)
G805600 NA other downstream 194637 42346176 ~ 42348786 (+)
G807677 NA other downstream 2044176 44195715 ~ 44196041 (+)
G807841 NA other downstream 2291123 44442662 ~ 44453077 (+)
G809685 NA other downstream 3983192 46134731 ~ 46135732 (+)

Expression


Co-expression Network