Gene
RNA
| Item | Value |
|---|---|
| gene id | G805538 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 42236890 ~ 42237230 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU916594 | True | 341 | lncRNA | 0.38 | 1 | 42236890 | 42237230 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532120 | LOC106572241 | coding | downstream | 76316 | 42155085 ~ 42160574 (-) |
| LOC110532119 | LOC106572245 | coding | downstream | 95277 | 42125255 ~ 42141613 (-) |
| rnf207b | LOC106572244 | coding | downstream | 122525 | 42098270 ~ 42114365 (-) |
| LOC110533012 | LOC106572332 | coding | downstream | 149588 | 42085331 ~ 42087302 (-) |
| LOC110532116 | LOC106572333 | coding | downstream | 160041 | 42075577 ~ 42076849 (-) |
| LOC110532125 | vps13d | coding | upstream | 26008 | 42263238 ~ 42289818 (-) |
| LOC118966051 | NA | coding | upstream | 60721 | 42297951 ~ 42299962 (-) |
| LOC110532126 | LOC106572238 | coding | upstream | 76258 | 42313488 ~ 42341574 (-) |
| LOC110532127 | LOC106572237 | coding | upstream | 108652 | 42345882 ~ 42404462 (-) |
| LOC110532130 | LOC106572235 | coding | upstream | 199537 | 42436767 ~ 42484817 (-) |
| G805487 | NA | non-coding | downstream | 86888 | 42149803 ~ 42150002 (-) |
| G805483 | NA | non-coding | downstream | 90674 | 42145900 ~ 42146216 (-) |
| G805482 | NA | non-coding | downstream | 91495 | 42145078 ~ 42145395 (-) |
| G805481 | NA | non-coding | downstream | 92104 | 42144537 ~ 42144786 (-) |
| G805467 | LOC102779685 | non-coding | downstream | 111725 | 42118515 ~ 42125165 (-) |
| G805550 | NA | non-coding | upstream | 20322 | 42257552 ~ 42269052 (-) |
| G805569 | NA | non-coding | upstream | 50338 | 42287568 ~ 42287836 (-) |
| G805553 | NA | non-coding | upstream | 52596 | 42289826 ~ 42290153 (-) |
| G805571 | NA | non-coding | upstream | 55722 | 42292952 ~ 42293579 (-) |
| G805597 | NA | non-coding | upstream | 94947 | 42332177 ~ 42332438 (-) |
| G804543 | LOC106572259 | other | downstream | 798919 | 41437030 ~ 41437971 (-) |
| G804255 | NA | other | downstream | 1251645 | 40984482 ~ 40985245 (-) |
| wdr6 | wdr6 | other | downstream | 1320916 | 40904738 ~ 40916073 (-) |
| G804307 | NA | other | downstream | 1324532 | 40862589 ~ 40912358 (-) |
| G806724 | LOC106572208 | other | upstream | 1094700 | 43331930 ~ 43339589 (-) |
| prdm16 | prdm16 | other | upstream | 1703336 | 43781726 ~ 44015554 (-) |
| tafa5l | LOC106572193 | other | upstream | 2011568 | 44247091 ~ 44292397 (-) |
| G807941 | NA | other | upstream | 2124186 | 44361416 ~ 44362166 (-) |
| G808375 | NA | other | upstream | 2397329 | 44634559 ~ 44636846 (-) |
