G805423


Basic Information

Item Value
gene id G805423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 42289554 ~ 42291000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU916463
tgatgagcttcggatgttttcactcacgagactcccagttagatagcaagtGAACAaaaaagtgaaaattatggtcagtaaagaacattttaagctcgtctctcaattcaaaaaacgTGTCTATACTTTTCCCCTTGATAATTAGCGCACTTCCGTATgctgtaaaagcgttacatggtcgctgccgatatcattgcataatgcagaaagtACACGAGAGTTCatgggccttgctttaacaaagttaaccatcttcactgtagtgtccaaaatgtctttcaagctgacagacattcccttggcagcaagatcccctcggtggatgctgcagtgtacccaagtgccaatgggagcaactgcttgcacgcgcgttaccactccactatgtctcccatTCATGgtttttgcgccatcagtacagataccaacacatcttgaccacatGTCCATTTGATGTcgcaaagctgtccagtacttaaaaaatatcctctcctattgtcctggtttccagtggtttgcttgtatgcaaagcagtaattggtttaaaacatctcctgccatacCACTGATGCGTCGTAAAACCGTGTtatttgatgaagacattgtctgtatatatttttttgccttttccccccagcattgtcccagccatatccgcggcagcaggaagaattaagtgccccacaatagtatggggcttgcctgtcctagccactcggtagctcaccatataagacgtttctggccccttcttattaatggtatctgttgcttttatacatgtcttactacctGAAAAtcatcttaattctcgctcaaaagactcccgtggcttatttttcaaatttgcatgttttgtttctaaatgtctgcgcaagggTGAAGGTTTCAACGAGTTgagagatagtacttttgcacatataacacactgtggctgaggaaaggcaatactcccaatataagtgaaccccaaatcaatgtagttatCATATTTGCGCCTGTTTGATGgcccaacgtccctgtctgttgttcggtgctttcccgcgtaagggggcagtagctcttaggctgcatcagattcacaactgtcagtgtccatgctagctgggctaacaaatTTAGAAtaactgatgctagcattggatgtgctcgtggaagcagaaacacttgtgtcgtcgacaggtgcaggtgtagtactgctggtagtagcagtactaccagtagaggtggtatgtgtctctatggacgcgaGCCTTACTATTTTTAAACCATTTATCCATTTTCGAgcaaacagaatgagcagcagctacgtctGGCTACATAAGGACtattagtggaattcccgcgagatagtaacagttaatgtgattggatgtaaattatttgactaggctacctgtatttgacattgttgtgatttcactgaacactagatggtaaaaaaaat

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU916463 True 1447 lncRNA 0.43 1 42289554 42291000

Neighbor

gene id symbol gene type direction distance location
LOC110532123 LOC106572239 coding upstream 43128 42237344 ~ 42246426 (+)
LOC110532122 LOC106572240 coding upstream 52915 42209835 ~ 42236639 (+)
LOC118966050 NA coding upstream 110233 42160412 ~ 42179321 (+)
LOC110532121 LOC106572248 coding upstream 164685 42118391 ~ 42124869 (+)
LOC110532118 LOC106566808 coding upstream 189605 42094188 ~ 42099949 (+)
LOC110532129 LOC106572329 coding downstream 134082 42425082 ~ 42431053 (+)
glut1b LOC106572233 coding downstream 226146 42496861 ~ 42529048 (+)
trappc6b trappc6b coding downstream 250021 42541021 ~ 42546531 (+)
tpx2 LOC106572230 coding downstream 255845 42546845 ~ 42556493 (+)
LOC110532135 LOC106566930 coding downstream 272408 42563408 ~ 42565334 (+)
G805422 NA non-coding upstream 6 42289290 ~ 42289548 (+)
G805323 rcc2 non-coding upstream 71487 42157527 ~ 42218067 (+)
G805348 NA non-coding upstream 135055 42154291 ~ 42154499 (+)
G805344 NA non-coding upstream 138015 42151295 ~ 42151539 (+)
G805340 NA non-coding upstream 142879 42146468 ~ 42146675 (+)
G805601 NA non-coding downstream 54601 42345601 ~ 42345839 (+)
G805638 NA non-coding downstream 107645 42398645 ~ 42398855 (+)
G805640 NA non-coding downstream 110314 42401314 ~ 42401631 (+)
G805673 NA non-coding downstream 166630 42457630 ~ 42457832 (+)
LOC110532114 LOC106572334 other upstream 265151 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 854131 41423598 ~ 41452922 (+)
G803728 NA other upstream 1268052 41020936 ~ 41021502 (+)
G803457 NA other upstream 1821552 40467628 ~ 40468002 (+)
G803437 selenok other upstream 1839615 40442896 ~ 40449939 (+)
G805451 NA other downstream 41093 42332093 ~ 42332438 (+)
G805600 NA other downstream 55176 42346176 ~ 42348786 (+)
G807677 NA other downstream 1904715 44195715 ~ 44196041 (+)
G807841 NA other downstream 2151662 44442662 ~ 44453077 (+)
G809685 NA other downstream 3843731 46134731 ~ 46135732 (+)

Expression


Co-expression Network