Gene
RNA
| Item | Value |
|---|---|
| gene id | G805640 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 42401314 ~ 42401631 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU916705 | True | 265 | lncRNA | 0.42 | 2 | 42401314 | 42401631 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532123 | LOC106572239 | coding | upstream | 154888 | 42237344 ~ 42246426 (+) |
| LOC110532122 | LOC106572240 | coding | upstream | 164675 | 42209835 ~ 42236639 (+) |
| LOC118966050 | NA | coding | upstream | 221993 | 42160412 ~ 42179321 (+) |
| LOC110532121 | LOC106572248 | coding | upstream | 276445 | 42118391 ~ 42124869 (+) |
| LOC110532118 | LOC106566808 | coding | upstream | 301365 | 42094188 ~ 42099949 (+) |
| LOC110532129 | LOC106572329 | coding | downstream | 23451 | 42425082 ~ 42431053 (+) |
| glut1b | LOC106572233 | coding | downstream | 115515 | 42496861 ~ 42529048 (+) |
| trappc6b | trappc6b | coding | downstream | 139390 | 42541021 ~ 42546531 (+) |
| tpx2 | LOC106572230 | coding | downstream | 145214 | 42546845 ~ 42556493 (+) |
| LOC110532135 | LOC106566930 | coding | downstream | 161777 | 42563408 ~ 42565334 (+) |
| G805638 | NA | non-coding | upstream | 2459 | 42398645 ~ 42398855 (+) |
| G805601 | NA | non-coding | upstream | 55475 | 42345601 ~ 42345839 (+) |
| G805423 | NA | non-coding | upstream | 110314 | 42289554 ~ 42291000 (+) |
| G805422 | NA | non-coding | upstream | 111766 | 42289290 ~ 42289548 (+) |
| G805323 | rcc2 | non-coding | upstream | 183247 | 42157527 ~ 42218067 (+) |
| G805673 | NA | non-coding | downstream | 55999 | 42457630 ~ 42457832 (+) |
| G805694 | NA | non-coding | downstream | 130751 | 42532382 ~ 42579499 (+) |
| G805749 | NA | non-coding | downstream | 213229 | 42614860 ~ 42615200 (+) |
| G805779 | NA | non-coding | downstream | 260184 | 42661815 ~ 42664451 (+) |
| G805600 | NA | other | upstream | 52528 | 42346176 ~ 42348786 (+) |
| G805451 | NA | other | upstream | 68876 | 42332093 ~ 42332438 (+) |
| LOC110532114 | LOC106572334 | other | upstream | 376911 | 42021496 ~ 42027071 (+) |
| LOC110532096 | LOC106572259 | other | upstream | 965891 | 41423598 ~ 41452922 (+) |
| G803728 | NA | other | upstream | 1379812 | 41020936 ~ 41021502 (+) |
| G807677 | NA | other | downstream | 1794084 | 44195715 ~ 44196041 (+) |
| G807841 | NA | other | downstream | 2041031 | 44442662 ~ 44453077 (+) |
| G809685 | NA | other | downstream | 3733100 | 46134731 ~ 46135732 (+) |
| G812143 | NA | other | downstream | 5580370 | 47982001 ~ 47982301 (+) |
| G812688 | LOC106572106 | other | downstream | 6143823 | 48545454 ~ 48570593 (+) |
