Gene
RNA
| Item | Value |
|---|---|
| gene id | G805779 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 42661815 ~ 42664451 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU916858 | True | 314 | lncRNA | 0.38 | 2 | 42661815 | 42664451 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532136 | LOC106572228 | coding | upstream | 65118 | 42571812 ~ 42596697 (+) |
| LOC110532135 | LOC106566930 | coding | upstream | 96481 | 42563408 ~ 42565334 (+) |
| tpx2 | LOC106572230 | coding | upstream | 105322 | 42546845 ~ 42556493 (+) |
| trappc6b | trappc6b | coding | upstream | 115284 | 42541021 ~ 42546531 (+) |
| glut1b | LOC106572233 | coding | upstream | 132767 | 42496861 ~ 42529048 (+) |
| LOC110532140 | LOC106566931 | coding | downstream | 25842 | 42690293 ~ 42695335 (+) |
| foxp3-1 | foxp3-1 | coding | downstream | 34500 | 42698951 ~ 42747753 (+) |
| LOC110532144 | LOC106572221 | coding | downstream | 88825 | 42753276 ~ 42867302 (+) |
| LOC110532147 | LOC106572219 | coding | downstream | 238645 | 42903096 ~ 42911687 (+) |
| LOC110532148 | LOC106572218 | coding | downstream | 247932 | 42912383 ~ 42930990 (+) |
| G805749 | NA | non-coding | upstream | 46615 | 42614860 ~ 42615200 (+) |
| G805694 | NA | non-coding | upstream | 82316 | 42532382 ~ 42579499 (+) |
| G805673 | NA | non-coding | upstream | 203983 | 42457630 ~ 42457832 (+) |
| G805640 | NA | non-coding | upstream | 260184 | 42401314 ~ 42401631 (+) |
| G805781 | NA | non-coding | downstream | 1318 | 42665769 ~ 42665983 (+) |
| G805786 | NA | non-coding | downstream | 13085 | 42677536 ~ 42677836 (+) |
| G805788 | NA | non-coding | downstream | 14693 | 42679144 ~ 42679349 (+) |
| G806141 | NA | non-coding | downstream | 220234 | 42884685 ~ 42885267 (+) |
| G806227 | NA | non-coding | downstream | 255081 | 42919532 ~ 42920390 (+) |
| G805600 | NA | other | upstream | 313029 | 42346176 ~ 42348786 (+) |
| G805451 | NA | other | upstream | 329377 | 42332093 ~ 42332438 (+) |
| LOC110532114 | LOC106572334 | other | upstream | 637412 | 42021496 ~ 42027071 (+) |
| LOC110532096 | LOC106572259 | other | upstream | 1226392 | 41423598 ~ 41452922 (+) |
| G803728 | NA | other | upstream | 1640313 | 41020936 ~ 41021502 (+) |
| G807677 | NA | other | downstream | 1531264 | 44195715 ~ 44196041 (+) |
| G807841 | NA | other | downstream | 1778211 | 44442662 ~ 44453077 (+) |
| G809685 | NA | other | downstream | 3470280 | 46134731 ~ 46135732 (+) |
| G812143 | NA | other | downstream | 5317550 | 47982001 ~ 47982301 (+) |
| G812688 | LOC106572106 | other | downstream | 5881003 | 48545454 ~ 48570593 (+) |
