G806245


Basic Information

Item Value
gene id G806245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 42970823 ~ 42971089 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU917436
caatgtgattttctggattttttttctcattttgtctgtcatagttgaagtgtacctatgatgaaaattacacgcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactctatgTATGATGAAGACTTTATCTACATTTCTCATCTTTGTAAAAGCGGGCTCATTCGAGATTTGAACCAGAGACCAATCGCActctaagcgagaatcatacacAGGGATAAAGGAACCCATTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU917436 True 267 lncRNA 0.38 1 42970823 42971089

Neighbor

gene id symbol gene type direction distance location
LOC110532149 LOC106572217 coding upstream 7795 42935264 ~ 42963028 (+)
LOC110532148 LOC106572218 coding upstream 39833 42912383 ~ 42930990 (+)
LOC110532147 LOC106572219 coding upstream 59136 42903096 ~ 42911687 (+)
LOC110532144 LOC106572221 coding upstream 103521 42753276 ~ 42867302 (+)
foxp3-1 foxp3-1 coding upstream 223070 42698951 ~ 42747753 (+)
LOC110531181 LOC106572211 coding downstream 294428 43265517 ~ 43275006 (+)
taf10 LOC106572212 coding downstream 314752 43285841 ~ 43287979 (+)
ppih ppih coding downstream 317060 43288149 ~ 43323809 (+)
ybx1 LOC106572208 coding downstream 358279 43329368 ~ 43335690 (+)
acot7 acot7 coding downstream 537889 43508978 ~ 43579823 (+)
G806244 NA non-coding upstream 84 42970513 ~ 42970739 (+)
G806243 NA non-coding upstream 818 42969775 ~ 42970005 (+)
G806227 NA non-coding upstream 50433 42919532 ~ 42920390 (+)
G806141 NA non-coding upstream 85556 42884685 ~ 42885267 (+)
G805788 NA non-coding upstream 291474 42679144 ~ 42679349 (+)
G806246 NA non-coding downstream 1164 42972253 ~ 42972528 (+)
G806318 NA non-coding downstream 114245 43085334 ~ 43085625 (+)
G806322 NA non-coding downstream 118402 43089491 ~ 43089749 (+)
G806334 NA non-coding downstream 145153 43116242 ~ 43116456 (+)
G806399 NA non-coding downstream 250995 43222084 ~ 43222295 (+)
G805600 NA other upstream 622037 42346176 ~ 42348786 (+)
G805451 NA other upstream 638385 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 946420 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 1535400 41423598 ~ 41452922 (+)
G803728 NA other upstream 1949321 41020936 ~ 41021502 (+)
G807677 NA other downstream 1224626 44195715 ~ 44196041 (+)
G807841 NA other downstream 1471573 44442662 ~ 44453077 (+)
G809685 NA other downstream 3163642 46134731 ~ 46135732 (+)
G812143 NA other downstream 5010912 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 5574365 48545454 ~ 48570593 (+)

Expression


Co-expression Network