G806246


Basic Information

Item Value
gene id G806246
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 42972253 ~ 42972528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU917437
gtcgccctctctgcgggttgtttattttgccatcatatacatttgaagaggatctatgtcttacctgtgttttgacattaaaggactctgtttttgttaaaccgcttttgggtcctcactcacgtgcacaacagaagaatctgaccaagaatggacccagcgacttcggatcctctccactcagccgtcgagatccagggagcgatgctaggcagacacgagcaggaattgtctgctgctcgacatgccgttgagaccctggccgcccaagtctcc

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU917437 True 276 lncRNA 0.51 1 42972253 42972528

Neighbor

gene id symbol gene type direction distance location
LOC110532149 LOC106572217 coding upstream 9225 42935264 ~ 42963028 (+)
LOC110532148 LOC106572218 coding upstream 41263 42912383 ~ 42930990 (+)
LOC110532147 LOC106572219 coding upstream 60566 42903096 ~ 42911687 (+)
LOC110532144 LOC106572221 coding upstream 104951 42753276 ~ 42867302 (+)
foxp3-1 foxp3-1 coding upstream 224500 42698951 ~ 42747753 (+)
LOC110531181 LOC106572211 coding downstream 292989 43265517 ~ 43275006 (+)
taf10 LOC106572212 coding downstream 313313 43285841 ~ 43287979 (+)
ppih ppih coding downstream 315621 43288149 ~ 43323809 (+)
ybx1 LOC106572208 coding downstream 356840 43329368 ~ 43335690 (+)
acot7 acot7 coding downstream 536450 43508978 ~ 43579823 (+)
G806245 NA non-coding upstream 1164 42970823 ~ 42971089 (+)
G806244 NA non-coding upstream 1514 42970513 ~ 42970739 (+)
G806243 NA non-coding upstream 2248 42969775 ~ 42970005 (+)
G806227 NA non-coding upstream 51863 42919532 ~ 42920390 (+)
G806141 NA non-coding upstream 86986 42884685 ~ 42885267 (+)
G806318 NA non-coding downstream 112806 43085334 ~ 43085625 (+)
G806322 NA non-coding downstream 116963 43089491 ~ 43089749 (+)
G806334 NA non-coding downstream 143714 43116242 ~ 43116456 (+)
G806399 NA non-coding downstream 249556 43222084 ~ 43222295 (+)
G806400 NA non-coding downstream 256108 43228636 ~ 43228927 (+)
G805600 NA other upstream 623467 42346176 ~ 42348786 (+)
G805451 NA other upstream 639815 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 947850 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 1536830 41423598 ~ 41452922 (+)
G803728 NA other upstream 1950751 41020936 ~ 41021502 (+)
G807677 NA other downstream 1223187 44195715 ~ 44196041 (+)
G807841 NA other downstream 1470134 44442662 ~ 44453077 (+)
G809685 NA other downstream 3162203 46134731 ~ 46135732 (+)
G812143 NA other downstream 5009473 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 5572926 48545454 ~ 48570593 (+)

Expression


Co-expression Network