XLOC_027139 (cped1)


Basic Information

Item Value
gene id XLOC_027139
gene name cped1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 10616626 ~ 10704585 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053478
GGTCGTTTAGCTAGGAAAATGTTATTGGGATTATGCGGGTTAACGCAAACCAGGTGCGCTCCTGACAAATCAAAAGAACAGATCCAAACATCCTCTGTTTTGGCGGCTTACACCTTTAGCATTTTCTGCTACCGTAACCTTAGTTTTAATCGCTGTAAAAATAGAAAACAGACGTCACGGTGGTCTCCAGGCTCTCTTTTTTTAAAGCTTAGGTGATTTTAGCGGTTCTTTAAAAGCGTCACACTTGTGCGCGCGAGACGCGACAATTACGCTGCCCAGAAGTTAAAAACAAGATTGCGAAACGACTGCTATCTAGCACGTATTGTATGAATAGTCGTTTAAAAGTAATATCTTGTAGAATCCGACAACTTTACAGCGGTTTGGTAGAGAGGCAGACGCTTTCTGACAGCGCGCTCTGCGTGAAGGAGGCGTATCATTACTCTTCAGTCATGAGGTTCTGCTCGGGAGTGTTTTTAATCACCCGAGGGGCTCAGCAGctttaagaagaaaaaagaagCCTTCAGAAAAACTTTTCACTCTGCTTTGATACCTGGACGTTTGAAACGAGACTTCCCAAACACTCGTCGAATTTAGCTGAAGATTTTCCGCGATAATGTCATGAACGCGTTCCTCGGATATGAGCGCTTTTAAACTGCGCGTTTGAGCGCTTGTCGCCGGACAGCGCGCCGTGATCTGGAGGGATGATGAGGGGACCAAACGCACATTCCCAATGGTATGTCTCTTGACTCTGTCCAGGAACCTTTGTGCAGGAGTGGGAATGGTTTTCCGTTGGGTATGGCCGCTCCGTCGGAGGTGCTGCACGGGTCCTCTTCTGCTGCTGGGCATCGCCGTGGGGCTCTTTTACCACACTGTGACTATGGACCGGGACAGAACCGAGATCAAGTCCAGTCAACGGGACCAAAGGAACAAATCAGCTGGCTTTGATTATGAACTTCTGCTCAAGAACCCAGAGAGACTCATATCCTTACTAGAAGCATCAgTGCGCCATTCTAAAGGCAGCTGTGCGGGAAAAGCCATCATTCTGACCGGCCAGCATGCTCCCACTGACACTGAGGTTCAGCTGTACCATAGAGTCCTCCAGCAGCAGGGATATCGAGTGGATCAGGCCCGATATGCAGAGACCAGCATCTCACTCAGACAGGACCGAAGAGATGGAAGAGACTGGTCTGTCTTGATATGCTTAAAAGGCTCTGAAAAGAGTTGTCTGCGTAAAATCAACTTCGCCCATCCACAGCACCACCAGAGGGTTAACATAATACCAGCTTTTGCCGGAGCGTTTCTGGACATGGGCGGAGTCTGCCGGTTTTTGACGAACAGCAAGTTGCCAGGAGCGACATTACCCATAAACCCCTCAGCCTGCGCCTTTTCCACATCTCCACTAGAGGGAATCCAAAATACTAATGATGCATGGAGGCAGCCAATCACACACAACCATTCAGACAATCAGGGATTAAATGCGACCGTAAACGTGTACGTCCTGGTTACTTCTGCAACACCACTGACCGCTTTCCTCCACCGCACAGCCCTGGTCAGAACTCCCCAGGATAAAGCTAGTTACGCCACTGAGctACAGGTATTTTTCAGAGAGAGACTGGGTTCAGTTGTCTCTCATCAGGTGATCAGACACATCAATCATGCTATCAGTGAAGTCCTTAAAGCTGCGCTGTTCAGCACAAAGGACAGCAGCTCCTCACCCAGGTGTCAGTTGTGTTTTCAGTTAATGACCTTCTCGTTGCTCTATAATTCTTCTCTTCGTCCAGTGGTGGTGAAGCTTCAGACTGACCTACACTTTGATGGAATGAAGGATCACTTCGATGGGCAGATAGCCAAAGAGTATATGCTGGAGGATGTTCTCAAACTGCTTTTCCCAACATGCAACAGTGAATCTGCAGTGCCCAGTTCCAGAGTTAACATACAGGAGGAGAATCAAAAGTATGCTGGCTGTGAGGAACCAAACACTCTCTGTCTGCCTCCAGATGAGATGCATTTACTGGTGCAGTTCAATCGGCACCTCAGAAATCCAGGACCCTTTCAGCTGCTGTATCCTGTATCTCCTCCTGCTGATGATCTAATCCAGAAAAAGCCCCTCAGCGCACAGGATTATGGATGGAGACCAGCTCTCATGGCTCTGCTCCAAAAGCTCAGTCTTTACTACACGACAAGACATCAGACTGAAAGCTTGGACGACTCAAGGAGCCCAGAGGCATCAGAATTACTGTCAGGAAAAGgcaggtgtgttgattcACATCTGAGGCAGCTTTACACAGACCCTCCAATGGTGCTGATGCCAGCGTTTAGCGCATGGGTGAAGGAATATCGAGCTGAAGTCCCATTTGATGTGATCACAATTCAGATCCGGCCCGAACCAGTCATGCCACATTGTCACATTCACCTGGATGAACATCGCGGACCCAGGATGGCGAATTACCCAGTTGGCCTGGGCAACAGCAGAATCAACATTCTGGTGATGGACGAATCAGAGGCCGAGCCTGTCGTCATGACGATATACACTCTAAACATATACCGCGAAAGCCGGCCCAGTCTGCCAATGTTTGATGAGTATGTGATGTGCAGTTTTGTGCAGGACTGCGGCCTAGTCGTCCGGCCAGACCAGCCCTGCGGTTTGGAGCCCATTCCAGGAGTGAGATCTTCAGGAGAGGCCCAGGCTTCACTTCGGCCTTGCCTCTCAGGAGATGAACCTGGCCGCTGGGTCGTCCCGTGCCTGAGCTGTTCAGACAACAGGACTTGTGATTGGAGAGAGGTTTCCTGGCAGCCGGACAATTGTTATCACCCACTGCTGGATCAACCTCAGCTGCAGTCCTGCATGATGGAACGCAAGGTCCTGTTTATCGGGGACTCCACCAATCGAGGGATGATGTACTACTTGATGGAGAGGGTGAACACCACGCTGGAGGACTGGGACAAAGCCCACAACACCATCGTCTACCACAACCTGAACCAAGGCCGAACTATCGTCAGCTACTCCTACTACCCACAGTTCTGGCTGCCAAAGAGCCACAGACCCACCTTCCAAAGAGCTCTGCAGCAGCTTctagaaagGTCACAGCCGCTGGAGAACTCTCCTCAGACAGTGCTGGTCGCTGGAGGGGTGCAATGGCTGAacctgaaccatttgaggaccattCGGCAGGTTTTGGAGAGGGAGGGTCTTGAAAACATCATGGTGGTGGTGAAGTCTTTAGGAATGGGTTTCCATCTGCCCGTAGATGGTATCCGCTCCCTGTCACTGAATGGTGTGCAAGAACTCTATAATGCGAACAAGAAGATTCTGGAAAGTGCCAAGCATCTTGGGTATGAGGTCATTGACACGCTCAGCATCACCATGGGCCGTTATAAGGAGTTCCTGCAGGGACGATGTGCTTGCCATTTCCATGAGGTCTATAAGCTTCCCTTTCCAACTGCTGCTTCCCAAAGAAAGCTGAAGATTTTGAGGGTGGGTGGAAAAAGCGGGAGTCTGGCCGATGAACAAACGGGCCCTCAAGAGCACGAAGATCCATCATGTCAACCTGACGTGTCCTACCAAGTAAAGGGACCAGTGAACGCTGTGTACTCTGAGATCCTCCTCAGCAGGATATGTTTCAATCACGCCATCATTGGGACCATTCGCCAACATTAA
>TCONS_00053479
ATCCAAACATCCTCTGTTTTGGCGGCTTACACCTTTAGCATTTTCTGCTACCGTAACCTTAGTTTTAATCGCTGTAAAAATAGAAAACAGACGTCACGGTGGTCTCCAGGCTCTCTTTTTTTAAAGCTTAGGTGATTTTAGCGGTTCTTTAAAAGCGTCACACTTGTGCGCGCGAGACGCGACAATTACGCTGCCCAGAAGTTAAAAACAAGATTGCGAAACGACTGCTATCTAGCACGTATTGTATGAATAGTCGTTTAAAAGTAATATCTTGTAGAATCCGACAACTTTACAGCGGTTTGGTAGAGAGGCAGACGCTTTCTGACAGCGCGCTCTGCGTGAAGGAGGCGTATCATTACTCTTCAGTCATGAGGTTCTGCTCGGGAGTGTTTTTAATCACCCGAGGGGCTCAGCAGctttaagaagaaaaaagaagCCTTCAGAAAAACTTTTCACTCTGCTTTGATACCTGGACGTTTGAAACGAGACTTCCCAAACACTCGTCGAATTTAGCTGAAGATTTTCCGCGATAATGTCATGAACGCGTTCCTCGGATATGAGCGCTTTTAAACTGCGCGTTTGAGCGCTTGTCGCCGGACAGCGCGCCGTGATCTGGAGGGATGATGAGGGGACCAAACGCACATTCCCAATGGTATGTCTCTTGACTCTGTCCAGGAACCTTTGTGCAGGAGTGGGAATGGTTTTCCGTTGGGTATGGCCGCTCCGTCGGAGGTGCTGCACGGGTCCTCTTCTGCTGCTGGGCATCGCCGTGGGGCTCTTTTACCACACTGTGACTATGGACCGGGACAGAACCGAGATCAAGTCCAGTCAACGGGACCAAAGGAACAAATCAGCTGGCTTTGATTATGAACTTCTGCTCAAGAACCCAGAGAGACTCATATCCTTACTAGAAGCATCAgTGCGCCATTCTAAAGGCAGCTGTGCGGGAAAAGCCATCATTCTGACCGGCCAGCATGCTCCCACTGACACTGAGGTTCAGCTGTACCATAGAGTCCTCCAGCAGCAGGGATATCGAGTGGATCAGGCCCGATATGCAGAGACCAGCATCTCACTCAGACAGGACCGAAGAGATGGAAGAGACTGGTCTGTCTTGATATGCTTAAAAGGCTCTGAAAAGAGTTGTCTGCGTAAAATCAACTTCGCCCATCCACAGCACCACCAGAGGGTTAACATAATACCAGCTTTTGCCGGAGCGTTTCTGGACATGGGCGGAGTCTGCCGGTTTTTGACGAACAGCAAGTTGCCAGGAGCGACATTACCCATAAACCCCTCAGCCTGCGCCTTTTCCACATCTCCACTAGAGGGAATCCAAAATACTAATGATGCATGGAGGCAGCCAATCACACACAACCATTCAGACAATCAGGGATTAAATGCGACCGTAAACGTGTACGTCCTGGTTACTTCTGCAACACCACTGACCGCTTTCCTCCACCGCACAGCCCTGGTCAGAACTCCCCAGGATAAAGCTAGTTACGCCACTGAGctACAGGTATTTTTCAGAGAGAGACTGGGTTCAGTTGTCTCTCATCAGGTGATCAGACACATCAATCATGCTATCAGTGAAGTCCTTAAAGCTGCGCTGTTCAGCACAAAGGACAGCAGCTCCTCACCCAGGTGTCAGTTGTGTTTTCAGTTAATGACCTTCTCGTTGCTCTATAATTCTTCTCTTCGTCCAGTGGTGGTGAAGCTTCAGACTGACCTACACTTTGATGGAATGAAGGATCACTTCGATGGGCAGATAGCCAAAGAGTATATGCTGGAGGATGTTCTCAAACTGCTTTTCCCAACATGCAACAGTGAATCTGCAGTGCCCAGTTCCAGAGTTAACATACAGGAGGAGAATCAAAAGTATGCTGGCTGTGAGGAACCAAACACTCTCTGTCTGCCTCCAGATGAGATGCATTTACTGGTGCAGTTCAATCGGCACCTCAGAAATCCAGGACCCTTTCAGCTGAAAAAGCCCCTCAGCGCACAGGATTATGGATGGAGACCAGCTCTCATGGCTCTGCTCCAAAAGCTCAGTCTTTACTACACGACAAGACATCAGACTGAAAGCTTGGACGACTCAAGGAGCCCAGAGGCATCAGAATTACTGTCAGGAAAAGGCAAgtgtgttgattcACATCTGAGGCAGCTTTACACAGACCCTCCAATGGTGCTGATGCCAGCGTTTAGCGCATGGGTGAAGGAATATCGAGCTGAAGTCCCATTTGATGTGATCACAATTCAGATCCGGCCCGAACCAGTCATGCCACATTGTCACATTCACCTGGATGAACATCGCGGACCCAGGATGGCGAATTACCCAGTTGGCCTGGGCAACAGCAGAATCAACATTCTGGTGATGGACGAATCAGAGGCCGAGCCTGTCGTCATGACGATATACACTCTAAACATATACCGCGAAAGCCGGCCCAGTCTGCCAATGTTTGATGAGTATGTGATGTGCAGTTTTGTGCAGGACTGCGGCCTAGTCGTCCGGCCAGACCAGCCCTGCGGTTTGGAGCCCATTCCAGGAGTGAGATCTTCAGGAGAGGCCCAGGCTTCACTTCGGCCTTGCCTCTCAGGAGATGAACCTGGCCGCTGGGTCGTCCCGTGCCTGAGCTGTTCAGACAACAGGACTTGTGATTGGAGAGAGGTTTCCTGGCAGCCGGACAATTGTTATCACCCACTGCTGGATCAACCTCAGCTGCAGTCCTGCATGATGGAACGCAAGGTCCTGTTTATCGGGGACTCCACCAATCGAGGGATGATGTACTACTTGATGGAGAGGGTGAACACCACGCTGGAGGACTGGGACAAAGCCCACAACACCATCGTCTACCACAACCTGAACCAAGGCCGAACTATCGTCAGCTACTCCTACTACCCACAGTTCTGGCTGCCAAAGAGCCACAGACCCACCTTCCAAAGAGCTCTGCAGCAGCTTctagaaaggtctGTCACAGCCGCTGGAGAACTCTCCTCAGACAGTGCTGGTCGCTGGAGGGGTGCAATGGCTGAacctgaaccatttgaggaccattCGGCAGGTTTTGGAGAGattacaaCCAATTACAACCAATGTGGTTTAGAAAGATTAACAGTAAATGTCTTATCTCTAAGGGAGGGTCTTGAAAACATCATGGTGGTGGTGAAGTCTTTAGGAATGGGTTTCCATCTGCCCGTAGATGGTATCCGCTCCCTGTCACTGAATGGTGTGCAAGAACTCTATAATGCGAACAAGAAGATTCTGGAAAGTGCCAAGCATCTTGGGTATGAGGTCATTGACACGCTCAGCATCACCATGGGCCGTTATAAGGAGTTCCTGCAGGGACGATGTGCTTGCCATTTCCATGAGGTCTATAAGCTTCCCTTTCCAACTGCTGCTTCCCAAAGAAAGCTGAAGATTTTGAGGGTGGGTGGAAAAAGCGGGAGTCTGGCCGATGAACAAACGGGCCCTCAAGAGCACGAAGATCCATCATGTCAACCTGACGTGTCCTACCAAGTAAAGGGACCAGTGAACGCTGTGTACTCTGAGATCCTCCTCAGCAGGATATGTTTCAATCACGCCATCATTGGGACCATTCGCCAACATTAAGACAATTAGCGGCCGGTGACGCTAAGCTGTGCGTGTTTTTCAAAGTGTGTGTGTAGCTGGTAATATGAGAAAAATGTGTATATAAGGGCTAAACCGATTGGTCCAAGTCaacttaaacatatgctggatcaaaGTGTTAAATTGAAGGACGATTTAGGTAGGTGTCTGTTTGTGCAGGTGTGCAACGGGATCCAGATGGACAAGGGGTGTAAGGGTGTACAATGGGACCCCCTGAAGCCCTGCCGAAATGACTTTGGCAGCTGCGGCTTAAGAGCAGGCAGTGACTGCGGTGCATCAGTCGCGCAGCCCCTTCAA

Function

symbol description
cped1 Orthologous to human CPED1 (cadherin like and PC-esterase domain containing 1).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041210-247 Orthologous to human CPED1 (cadherin like and PC-esterase domain containing 1).

Ensembl:

ensembl_id ENSDARG00000045747

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053478 False 3658 mRNA 0.50 21 10616626 10704270
TCONS_00053479 True 3919 mRNA 0.50 21 10616707 10704585

Neighbor

gene id symbol gene type direction distance location
XLOC_027138 ing3 coding upstream 1271 10604110 ~ 10615355 (+)
XLOC_027137 kcnd2 coding upstream 54452 10365857 ~ 10562174 (+)
XLOC_027136 flncb coding upstream 486277 10066840 ~ 10130349 (+)
XLOC_027135 NA coding upstream 555178 10058101 ~ 10061448 (+)
XLOC_027134 ccdc136b coding upstream 567440 10017049 ~ 10049186 (+)
XLOC_027140 wnt16 coding downstream 2170 10706755 ~ 10713584 (+)
XLOC_027141 NA coding downstream 10160 10714745 ~ 10715592 (+)
XLOC_027142 stab2 coding downstream 17210 10721795 ~ 10763547 (+)
XLOC_027143 NA coding downstream 59692 10764277 ~ 10791239 (+)
XLOC_027144 NA coding downstream 111545 10816130 ~ 10826992 (+)
XLOC_027131 NA non-coding upstream 727529 9867910 ~ 9889097 (+)
XLOC_027129 NA non-coding upstream 885954 9726795 ~ 9730672 (+)
XLOC_027126 NA non-coding upstream 981922 9623291 ~ 9634704 (+)
XLOC_027116 NA non-coding upstream 1263994 9346919 ~ 9352632 (+)
XLOC_027149 BX784029.3 non-coding downstream 498356 11202941 ~ 11238022 (+)
XLOC_027150 BX649349.1 non-coding downstream 581344 11285929 ~ 11289783 (+)

Expression


Co-expression Network