G806400


Basic Information

Item Value
gene id G806400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 43228636 ~ 43228927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU917600
CATTCCAGTACCATGTTTCACTTTCAATTTCAAAGATGAATTCAGTCCCGTATGCCCTAATCTCATCCTACACAACCTCCTCCTTTATGTTCCCATGATATGACACTATCTACCATGCAGATGTCCTTGTCTCTGCCAGAAATCTAACCCATTTTTCAGAATCAATGTTTTAATTTCTCCTCTACCCAACGGCACCTGTATGTCCACAATATTACTTTTCACTGCTCTTTTTgctattatacagtgcattcggaaagtactcagaccccttgactttttccacattttgtta

Function

NR:

description
PREDICTED: uncharacterized protein LOC107380515

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU917600 True 292 lncRNA 0.39 1 43228636 43228927

Neighbor

gene id symbol gene type direction distance location
LOC110532149 LOC106572217 coding upstream 265608 42935264 ~ 42963028 (+)
LOC110532148 LOC106572218 coding upstream 297646 42912383 ~ 42930990 (+)
LOC110532147 LOC106572219 coding upstream 316949 42903096 ~ 42911687 (+)
LOC110532144 LOC106572221 coding upstream 361334 42753276 ~ 42867302 (+)
foxp3-1 foxp3-1 coding upstream 480883 42698951 ~ 42747753 (+)
LOC110531181 LOC106572211 coding downstream 36590 43265517 ~ 43275006 (+)
taf10 LOC106572212 coding downstream 56914 43285841 ~ 43287979 (+)
ppih ppih coding downstream 59222 43288149 ~ 43323809 (+)
ybx1 LOC106572208 coding downstream 100441 43329368 ~ 43335690 (+)
acot7 acot7 coding downstream 280051 43508978 ~ 43579823 (+)
G806399 NA non-coding upstream 6341 43222084 ~ 43222295 (+)
G806334 NA non-coding upstream 112180 43116242 ~ 43116456 (+)
G806322 NA non-coding upstream 138887 43089491 ~ 43089749 (+)
G806318 NA non-coding upstream 143011 43085334 ~ 43085625 (+)
G806246 NA non-coding upstream 256108 42972253 ~ 42972528 (+)
G806403 LOC106572213 non-coding downstream 3942 43232869 ~ 43236516 (+)
G806404 NA non-coding downstream 8926 43237853 ~ 43238686 (+)
G806405 NA non-coding downstream 9775 43238702 ~ 43238919 (+)
G806406 NA non-coding downstream 10689 43239616 ~ 43239824 (+)
G806407 NA non-coding downstream 11336 43240263 ~ 43240623 (+)
G805600 NA other upstream 879850 42346176 ~ 42348786 (+)
G805451 NA other upstream 896198 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 1204233 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 1793213 41423598 ~ 41452922 (+)
G803728 NA other upstream 2207134 41020936 ~ 41021502 (+)
G807677 NA other downstream 966788 44195715 ~ 44196041 (+)
G807841 NA other downstream 1213735 44442662 ~ 44453077 (+)
G809685 NA other downstream 2905804 46134731 ~ 46135732 (+)
G812143 NA other downstream 4753074 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 5316527 48545454 ~ 48570593 (+)

Expression


Co-expression Network