G807665 (brpf3)


Basic Information

Item Value
gene id G807665
gene name brpf3
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44191067 ~ 44191777 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU919004
ACACGCAGCAGAAGGCATCGTCGTCGATGGCGCTCTGAGAGGGCGCCCGGCTGCGAGCCTCCCGGTAAGACTCCTCCTCCAGGCGGTCCACCAGCAGTTCGAAAGTGTCAGGGGAGACTGTGGCGTGGCCGTCTGACGCCCGCCTGGCGTTCACCATCTCCAGCCAGGCCGCGTCCTCCTCGTCCATGTCATACTCTGCCTCTGCCTCCTGCTCCTCTGCCGAGCGCTCTATGTAGCGGTAGTAGGCTGTGGGCAGAGAAGGCGCCGCACAGGGGATGAAGGCCTCCAGCATGCGGAAGGTGGGCTCGGGAAGGGGCGTCTGATGATGGTGGTGTGAGGAGTTAGTCTTGTTGTTGTGGGGTTGTGAGTGAGAGTTGGGGCAGTGGTTCTGAGGTGTGGAGGAAGAGGACGATTGTGTGGAGGAGGAATGTTTGGAGTCTTTCTTGCGGCCTCTGGGCATGGCGGGCGGCTTGCGTCCGGGGTTGGCACTGGCAGGTGCTACGGGCTGTTCACTGTTCTCTTTGTTGCTGTTGCACTCAGTGATGTCCTGGGCCGTCATCTCGTCCTCTGTGATGACCGTCAGAGGGTCCACGATGGAGATCCGGTGGAGCCTGCCATCCAAGTCTACTTCCACCACTTTCTGGGCCTGGGAATAAGTCAGTGTCTCTCTGGTTGGGGACACCTTGAGGCTGTAGGGTGAAGGGGAGCGCT

Function

symbol description
brpf3 Predicted to enable histone binding activity. Involved in histone H3-K14 acetylation and positive regulation of DNA replication. Part of MOZ/MORF histone acetyltransferase complex.

NR:

description
bromodomain and PHD finger-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU919004 True 711 lncRNA 0.61 1 44191067 44191777

Neighbor

gene id symbol gene type direction distance location
LOC110533015 NA coding upstream 156227 44034316 ~ 44034840 (+)
wrap73 wrap73 coding upstream 426205 43743468 ~ 43764862 (+)
LOC118966053 NA coding upstream 500426 43666812 ~ 43690641 (+)
LOC110531183 gpr153 coding upstream 543617 43591505 ~ 43647450 (+)
acot7 acot7 coding upstream 611244 43508978 ~ 43579823 (+)
LOC110532176 LOC106572191 coding downstream 233237 44425014 ~ 44429101 (+)
agrn LOC106572186 coding downstream 319276 44511053 ~ 44790843 (+)
LOC110532179 LOC106572187 coding downstream 608233 44800010 ~ 44857914 (+)
LOC110532181 LOC106572185 coding downstream 721187 44912964 ~ 44959122 (+)
prex1 LOC106572294 coding downstream 767799 44959576 ~ 45073059 (+)
G807656 NA non-coding upstream 12904 44177933 ~ 44178163 (+)
G807289 NA non-coding upstream 20751 44169996 ~ 44170316 (+)
G807273 mfn2 non-coding upstream 62317 44125065 ~ 44128750 (+)
G807215 NA non-coding upstream 100758 44019943 ~ 44090309 (+)
G807176 NA non-coding upstream 259761 43926951 ~ 43931306 (+)
G807678 NA non-coding downstream 4833 44196610 ~ 44249756 (+)
G807680 mk13 non-coding downstream 7998 44199775 ~ 44202288 (+)
G807712 NA non-coding downstream 52847 44244624 ~ 44307334 (+)
G807838 LOC106941359 non-coding downstream 246707 44438484 ~ 44450953 (+)
G808005 NA non-coding downstream 295679 44487456 ~ 44487730 (+)
G805600 NA other upstream 1842281 42346176 ~ 42348786 (+)
G805451 NA other upstream 1858629 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 2166664 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 2755644 41423598 ~ 41452922 (+)
G803728 NA other upstream 3169565 41020936 ~ 41021502 (+)
G807677 NA other downstream 3938 44195715 ~ 44196041 (+)
G807841 NA other downstream 250885 44442662 ~ 44453077 (+)
G809685 NA other downstream 1942954 46134731 ~ 46135732 (+)
G812143 NA other downstream 3790224 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 4353677 48545454 ~ 48570593 (+)

Expression


Co-expression Network