G807678


Basic Information

Item Value
gene id G807678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44196610 ~ 44249756 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU919018
CATTTATTGAGAAAACAAAGTTCctattacatacagttgaagtcgaacgtttacatacacttagaatggagtcattaaaactcttttcaaccactccacaattttttggtgaacaaactatagttttggcaagtcagttaggatatctactttgtgcacgacacaagtcatttttccaacaattgtttacagatattatttaacttatattcactctatcacaattccagtgggtcagacgtttacaaacaataagttgactgtgcctttaaacagcttggaaaattccagaaaatgatgtcatggctttagaagcttctcataggctaattgacatcatttgagtcaattggaggtgtacctgtggatgtatttcaaggcctaccttgatGTAACTATTTGGTCATAatcaccatcgttatgtttggaggaaaaagggggaggcttgcaagccgaagaacaccatcccaaccatga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU919018 True 477 lncRNA 0.37 2 44196610 44249756

Neighbor

gene id symbol gene type direction distance location
LOC110533015 NA coding upstream 161770 44034316 ~ 44034840 (+)
wrap73 wrap73 coding upstream 431748 43743468 ~ 43764862 (+)
LOC118966053 NA coding upstream 505969 43666812 ~ 43690641 (+)
LOC110531183 gpr153 coding upstream 549160 43591505 ~ 43647450 (+)
acot7 acot7 coding upstream 616787 43508978 ~ 43579823 (+)
LOC110532176 LOC106572191 coding downstream 175258 44425014 ~ 44429101 (+)
agrn LOC106572186 coding downstream 261297 44511053 ~ 44790843 (+)
LOC110532179 LOC106572187 coding downstream 550254 44800010 ~ 44857914 (+)
LOC110532181 LOC106572185 coding downstream 663208 44912964 ~ 44959122 (+)
prex1 LOC106572294 coding downstream 709820 44959576 ~ 45073059 (+)
G807665 brpf3 non-coding upstream 4833 44191067 ~ 44191777 (+)
G807656 NA non-coding upstream 18447 44177933 ~ 44178163 (+)
G807289 NA non-coding upstream 26294 44169996 ~ 44170316 (+)
G807273 mfn2 non-coding upstream 67860 44125065 ~ 44128750 (+)
G807215 NA non-coding upstream 106301 44019943 ~ 44090309 (+)
G807838 LOC106941359 non-coding downstream 188728 44438484 ~ 44450953 (+)
G808005 NA non-coding downstream 237700 44487456 ~ 44487730 (+)
G808027 NA non-coding downstream 253695 44503451 ~ 44503914 (+)
G808032 NA non-coding downstream 257492 44507248 ~ 44507477 (+)
G808145 NA non-coding downstream 531738 44781494 ~ 44782421 (+)
G807677 NA other upstream 569 44195715 ~ 44196041 (+)
G805600 NA other upstream 1847824 42346176 ~ 42348786 (+)
G805451 NA other upstream 1864172 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 2172207 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 2761187 41423598 ~ 41452922 (+)
G807841 NA other downstream 192906 44442662 ~ 44453077 (+)
G809685 NA other downstream 1884975 46134731 ~ 46135732 (+)
G812143 NA other downstream 3732245 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 4295698 48545454 ~ 48570593 (+)
G813071 NA other downstream 4709993 48959749 ~ 48959991 (+)

Expression


Co-expression Network