G807941


Basic Information

Item Value
gene id G807941
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44361416 ~ 44362166 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU919312
CTTCAGGCCACTGTCGGGTTGGTACACGCTCAGACTGAACGCCAGATTGAAAACCTAAAAGTAGGTGTGGTGAGTTACAGTGCACTGAATGCAGTTACAGTGCACTgaatctatttctctctctcttctcttccttttCCTGTTATCTTTtgtcgtgtctctctgtctcgctctcctgtctcttctctggtctgtctcttctctggtctgtctcttctgtctcttctctggtctgtctcttctctggtctgtctcttctctggtctgtctcttctgtctcttctcttgtctgtctcttctcttgtctgtctcttctgtctcttctctggtctgtcttttctgtctcttctctggtctgtctcttctgtctcttctctggtctgtctcttctctggtctgtctcttctctggtctctcttctctggtctgtctcttgtctctcttctctggtctgtctcttctgtctcttctctggtctgtctcttctgtctcttctctggtctgtctcttctgtctcttctctggtctgtctcttctgtctcttctctggtctgtctcttctgtctcttctcttgtctgtctcttct

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU919312 True 587 TUCP 0.47 2 44361416 44362166

Neighbor

gene id symbol gene type direction distance location
tafa5l LOC106572193 coding downstream 69019 44247091 ~ 44292397 (-)
mapk13 mk13 coding downstream 154951 44196588 ~ 44249763 (-)
brpf3b brpf3 coding downstream 168075 44178463 ~ 44193341 (-)
plod1a plod1 coding downstream 194428 44151220 ~ 44166988 (-)
mfn2 mfn2 coding downstream 210930 44121830 ~ 44150486 (-)
LOC110532177 LOC106572192 coding upstream 80202 44442368 ~ 44444009 (-)
LOC110532180 LOC106572190 coding upstream 500865 44863031 ~ 44870291 (-)
LOC100136637 LOC100329213 coding upstream 860513 45222679 ~ 45224379 (-)
rtel1 rtel1 coding upstream 863039 45225205 ~ 45281464 (-)
pdyn pdyn coding upstream 954398 45316564 ~ 45318766 (-)
G807893 NA non-coding downstream 54140 44244744 ~ 44307276 (-)
G807675 NA non-coding downstream 166868 44194341 ~ 44194548 (-)
G807655 NA non-coding downstream 183518 44177633 ~ 44177898 (-)
G807992 NA non-coding upstream 113651 44475817 ~ 44476053 (-)
G808013 NA non-coding upstream 132294 44494460 ~ 44494779 (-)
G808016 NA non-coding upstream 134886 44497052 ~ 44497280 (-)
G808031 NA non-coding upstream 144165 44506331 ~ 44506564 (-)
G808033 NA non-coding upstream 145146 44507312 ~ 44507553 (-)
prdm16 prdm16 other downstream 345960 43781726 ~ 44015554 (-)
G806724 LOC106572208 other downstream 1028713 43331930 ~ 43339589 (-)
LOC110532119 LOC106572245 other downstream 2222090 42125255 ~ 42141613 (-)
G804543 LOC106572259 other downstream 2923445 41437030 ~ 41437971 (-)
G808375 NA other upstream 272393 44634559 ~ 44636846 (-)
G809071 LOC106572179 other upstream 933690 45295856 ~ 45298740 (-)
zmynd12 zmynd12 other upstream 1825098 46187156 ~ 46200250 (-)
G810563 NA other upstream 1891348 46253514 ~ 46256922 (-)

Expression


Co-expression Network