G808027


Basic Information

Item Value
gene id G808027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44503451 ~ 44503914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU919403
cacaacatttctatatactatatttaaattgtttttaaataatgtttaaacttatatattgaaaggtttctagtttgctcagttaatttattccatttctttattgctctaaatcgaaatgttcttttgcccatttcttttttctgtctggataacgcatagatggtggacaatctattcctagtatttacggaatgtctgtctcttaccaactgaataccattgtgaatagaacttggccgttttaaatgatgtatattataaaataagataagcatgtttttttcaattatcttgtcgattgatgaccaaccaagaacactgcgcatgactgcaacagaatAACCATATCTCcgccttaaaacaatccttgctgctttattctgtgcattctgcagcctcctaacttcactagatgatgcatttccccagaccaccgaACAATAGTTCACTTGACTCTCAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU919403 True 464 lncRNA 0.34 1 44503451 44503914

Neighbor

gene id symbol gene type direction distance location
LOC110532176 LOC106572191 coding upstream 74350 44425014 ~ 44429101 (+)
LOC110533015 NA coding upstream 468611 44034316 ~ 44034840 (+)
wrap73 wrap73 coding upstream 738589 43743468 ~ 43764862 (+)
LOC118966053 NA coding upstream 812810 43666812 ~ 43690641 (+)
LOC110531183 gpr153 coding upstream 856001 43591505 ~ 43647450 (+)
agrn LOC106572186 coding downstream 7139 44511053 ~ 44790843 (+)
LOC110532179 LOC106572187 coding downstream 296096 44800010 ~ 44857914 (+)
LOC110532181 LOC106572185 coding downstream 409050 44912964 ~ 44959122 (+)
prex1 LOC106572294 coding downstream 455662 44959576 ~ 45073059 (+)
LOC110532183 LOC106572183 coding downstream 572650 45076564 ~ 45119186 (+)
G808005 NA non-coding upstream 15721 44487456 ~ 44487730 (+)
G807838 LOC106941359 non-coding upstream 52498 44438484 ~ 44450953 (+)
G807712 NA non-coding upstream 196117 44244624 ~ 44307334 (+)
G807678 NA non-coding upstream 253695 44196610 ~ 44249756 (+)
G807680 mk13 non-coding upstream 301163 44199775 ~ 44202288 (+)
G808032 NA non-coding downstream 3334 44507248 ~ 44507477 (+)
G808145 NA non-coding downstream 277580 44781494 ~ 44782421 (+)
G808184 NA non-coding downstream 369478 44873392 ~ 44873630 (+)
G808188 NA non-coding downstream 374269 44878183 ~ 44878382 (+)
G808199 NA non-coding downstream 401191 44905105 ~ 44905329 (+)
G807841 NA other upstream 50374 44442662 ~ 44453077 (+)
G807677 NA other upstream 307410 44195715 ~ 44196041 (+)
G805600 NA other upstream 2154665 42346176 ~ 42348786 (+)
G805451 NA other upstream 2171013 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 2479048 42021496 ~ 42027071 (+)
G809685 NA other downstream 1630817 46134731 ~ 46135732 (+)
G812143 NA other downstream 3478087 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 4041540 48545454 ~ 48570593 (+)
G813071 NA other downstream 4455835 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 4499405 48962187 ~ 49006710 (+)

Expression


Co-expression Network