G808375


Basic Information

Item Value
gene id G808375
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44634559 ~ 44636846 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU919787
GGAAGAGCAGCACGGCGAAGCCCAGCGTGGAGGTGGCCAGCAGGATGAGACATATGTTACAGGGGATCATAAAGTAGCGCACCACCAGGGACACCTTGTGTTGGTACATCCGGTCCCGCTCCGGGGGCGGCGTGGGGTAATGGCAGCTGGTCATGCTCCACTTCCAGAGTCCGTCCGCCCGGTGGGAAGGTACGGGTAACGGGGTGGGAGAAGAAGAACCCAAAGAACCAAGGAATAAAAATGACACCAGAAACGAGGGAGGAGAGAATGATAGACTGGTTGGTAATGGTTGGTAGATTCAGCCCTGAATCCAGCTGTGTTCCGCCGTGGGGAGGGAGTCGCAGCTGCTTTCAGAAAGATGCGTCGAGGAGCTTTCAATGGTTTCCAGGCAACTCATTTTGGACAGTAATAACATCCATTGGTGGGAAGATGACAGAAGGGTGTGGGCCTGCACTGCTATAGGCCACCAGCTGTCCATGCTACCTGCATTTTAATACAAGTACTGGAAAGGGGATGACAACAGATTTGTGTGTACGTATGTGGAGTGAGTATATGTACAATATGaaagtgtaaatgtgtgtgtgtgtatgtgtctctgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacgtgctaGATCAAAAGGTGCCAAAGTTCCACAGTAACTCAACAGTAATTACAGTAAGAAGCCTCCTTGATCTCTTTGCAGCACTGGTCCACTGTTGCAAAACACACTGGTCTCCTTATTGCCCCAGGAGCCCTCACAACACAAGCCAGgttccaccacactaccacagcattcgtcaagagtagctgctggtgaTTTGGCGGGGGAGCATCTTTCTCCAGCCTCCTGTGGCTGATAAACTGTGAGCTTGGGGCTAGAGCTCCGGCAGCTTTGGCGCTCTGAAGACATTCATTAGCCTCCTTTTCTTTTCCTTACAAAACGCTCcaaggaaaacaacaacaaccggCTCTTTGTTTTCACTTGGCTGCCCGCCGGCTTATTGTTCCTTATAGCTCTAGTCAGGACCGAAATAAAGGCAACAGCAACACGGCAATGCGACTGTCTTCTCCGAGCACGGAGCACGAAGCTTCCCCCGTCGCTGCACACTTGTATCTAGCGTTAGCGTATTTAGCAGGGGGGCTAGTAAGCAGCTGGCCACCACTCGATTAACCATATGCTCTTAGGAGCGTGAAGGGGATTCTTTTTTTCACCACCCACTTCCTCGATTCAAAACACTGTGGCCCCCTTCCCCCTCGCCACTCACATGTGGGGGCCACCCTTGGAGTCAGGAGAAAACAGGTCAGAAGAAGTAGAGAGGGGTGGAAAGTTGGAGAGGGGAACAATTTACGCCCCCGGCTCTGTACCTCAACATGAGTTGTCCTCCCCTCAGCTCTGTTCCGCCTGAGTCCGGCTATACAGAGAAGCGACAAACCTCAGCCCGACACACAGACTAAAGAAAACCCAcaaaagaaatggagagaggagggaagaaagaggggaGAAGTCTGTGCCAGATGAGAAATTAACAACAAGCCCTGAATACTTTTTATCTTTCTTTCCTCGTGTTGTCCACCCCTGATGGCATATTCATCCAAAAACAAATCGCAAGGGGGGTCTTGTTACCGCCCTCTGTCCGAGAGTGTCAAGTTGGTTTTCTCCTTTTCAAAAAAGCAGTCGCTTATTCACCCCTTCTTCATTGAGAGTAGAAGCTGCTCAGTTGCtcatttcactctctctctggctcactccctctttttttctcccttttctcAAGAATCCACTCCTTCTGTCTGTTCCTGCTCCAGAGGCTACTCCCGGTTGCTTGTCCTGGGCTTGGCTGCGGATGATCTCCTTCGAGTTGCTCCTCCGAGGGACAGGCCCATTCACTGGCAGCCAAAACAACAACTTGGAGCTTTGCGTATTCACGGAGTATTCACAGCGCACACAATCCCCAGGCAGCAGGTAGTCCACTGTGTTAATTCACTCTGCTGCTCAGCCAGCCAAGCCCTAgtcaacgagagagagagaggtagagagagagtagccaGCCAGCGAGCTGCAGATAGAGAcagccagagcagagcaggagagcgatagagtgagagaggaaagaggaagaaCAGACGAGCGGTGGCGCCTGACACTTCGTCCACCTCTTGCGTTTTACAACAGCGGCTGAGCGTGTTGTCTCCCGAGCACCGTCACTCTCCAGAGCAGCacttctccct

Function

NR:

description
PREDICTED: agrin isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU919787 True 2248 TUCP 0.52 2 44634559 44636846

Neighbor

gene id symbol gene type direction distance location
mtor mtor coding downstream 177600 44333485 ~ 44456959 (-)
LOC110532177 LOC106572192 coding downstream 190550 44442368 ~ 44444009 (-)
tafa5l LOC106572193 coding downstream 342162 44247091 ~ 44292397 (-)
mapk13 mk13 coding downstream 428094 44196588 ~ 44249763 (-)
brpf3b brpf3 coding downstream 441218 44178463 ~ 44193341 (-)
LOC110532180 LOC106572190 coding upstream 226185 44863031 ~ 44870291 (-)
LOC100136637 LOC100329213 coding upstream 585833 45222679 ~ 45224379 (-)
rtel1 rtel1 coding upstream 588359 45225205 ~ 45281464 (-)
pdyn pdyn coding upstream 679718 45316564 ~ 45318766 (-)
LOC110532194 LOC106572173 coding upstream 861045 45497891 ~ 45513979 (-)
G808303 NA non-coding downstream 99456 44532618 ~ 44535103 (-)
G808033 NA non-coding downstream 127006 44507312 ~ 44507553 (-)
G808031 NA non-coding downstream 127995 44506331 ~ 44506564 (-)
G808016 NA non-coding downstream 137279 44497052 ~ 44497280 (-)
G808013 NA non-coding downstream 139780 44494460 ~ 44494779 (-)
G808530 NA non-coding upstream 205149 44841995 ~ 44843473 (-)
G808538 NA non-coding upstream 221454 44858300 ~ 44860435 (-)
G808549 NA non-coding upstream 239738 44876584 ~ 44876783 (-)
G808550 NA non-coding upstream 240691 44877537 ~ 44877851 (-)
G808558 NA non-coding upstream 263129 44899975 ~ 44900289 (-)
G807941 NA other downstream 272393 44361416 ~ 44362166 (-)
prdm16 prdm16 other downstream 619103 43781726 ~ 44015554 (-)
G806724 LOC106572208 other downstream 1301856 43331930 ~ 43339589 (-)
LOC110532119 LOC106572245 other downstream 2495233 42125255 ~ 42141613 (-)
G809071 LOC106572179 other upstream 659010 45295856 ~ 45298740 (-)
zmynd12 zmynd12 other upstream 1550418 46187156 ~ 46200250 (-)
G810563 NA other upstream 1616668 46253514 ~ 46256922 (-)
G811300 NA other upstream 2541958 47178804 ~ 47181797 (-)

Expression


Co-expression Network