G808188


Basic Information

Item Value
gene id G808188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44878183 ~ 44878382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU919574
GTCACGGTAAGTCAATCAGTCATGACTATttctgtgtattttatagttatCCAGGAATGCATGGGTCATTAATACTCAGTCAATGCAGCATGTGATTAAATTAGCCAGCGCTGTCAACCGAGGGATTTGATGGTCAATGTATTACTAAACTCTGAACTGCTCAACTCAAAAAGCACCCAGGCTACCATTTATACTGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU919574 True 200 lncRNA 0.40 1 44878183 44878382

Neighbor

gene id symbol gene type direction distance location
LOC110532179 LOC106572187 coding upstream 20269 44800010 ~ 44857914 (+)
agrn LOC106572186 coding upstream 87340 44511053 ~ 44790843 (+)
LOC110532176 LOC106572191 coding upstream 449082 44425014 ~ 44429101 (+)
LOC110533015 NA coding upstream 843343 44034316 ~ 44034840 (+)
wrap73 wrap73 coding upstream 1113321 43743468 ~ 43764862 (+)
LOC110532181 LOC106572185 coding downstream 34582 44912964 ~ 44959122 (+)
prex1 LOC106572294 coding downstream 81194 44959576 ~ 45073059 (+)
LOC110532183 LOC106572183 coding downstream 198182 45076564 ~ 45119186 (+)
LOC110532184 LOC106572184 coding downstream 198529 45076911 ~ 45085575 (+)
chrna4b LOC106572182 coding downstream 302023 45176863 ~ 45191840 (+)
G808184 NA non-coding upstream 4553 44873392 ~ 44873630 (+)
G808145 NA non-coding upstream 95762 44781494 ~ 44782421 (+)
G808032 NA non-coding upstream 370706 44507248 ~ 44507477 (+)
G808027 NA non-coding upstream 374269 44503451 ~ 44503914 (+)
G808005 NA non-coding upstream 390453 44487456 ~ 44487730 (+)
G808199 NA non-coding downstream 26723 44905105 ~ 44905329 (+)
G808212 NA non-coding downstream 70455 44948837 ~ 44949422 (+)
G808244 NA non-coding downstream 115433 44993815 ~ 44995385 (+)
G808262 NA non-coding downstream 195691 45074073 ~ 45074321 (+)
G808702 NA non-coding downstream 270098 45148480 ~ 45148705 (+)
G807841 NA other upstream 425106 44442662 ~ 44453077 (+)
G807677 NA other upstream 682142 44195715 ~ 44196041 (+)
G805600 NA other upstream 2529397 42346176 ~ 42348786 (+)
G805451 NA other upstream 2545745 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 2853780 42021496 ~ 42027071 (+)
G809685 NA other downstream 1256349 46134731 ~ 46135732 (+)
G812143 NA other downstream 3103619 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 3667072 48545454 ~ 48570593 (+)
G813071 NA other downstream 4081367 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 4124937 48962187 ~ 49006710 (+)

Expression


Co-expression Network