G808212


Basic Information

Item Value
gene id G808212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44948837 ~ 44949422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU919622
TTGAGTGTGTGTCAGGATTGGGGTCAATTTCATTTAcattgtgactcaccacctggattcggtttTATGTtgcaacattttacattttgttttttacattggataaaagtAGTTTTTAGAGTGCAAACTTGATGCTCTGGcggatgatttgtttacctctggataaaaTGAAAACAGCCTGAGCAGCTCTGCtagcaacaatttcattacgcttttttgcgacgtttactgacaccggccatattcatcgggtgttgtacactttattttatttatttaacctttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgcttgttcaggggcaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU919622 True 372 lncRNA 0.38 2 44948837 44949422

Neighbor

gene id symbol gene type direction distance location
LOC110532179 LOC106572187 coding upstream 90923 44800010 ~ 44857914 (+)
agrn LOC106572186 coding upstream 157994 44511053 ~ 44790843 (+)
LOC110532176 LOC106572191 coding upstream 519736 44425014 ~ 44429101 (+)
LOC110533015 NA coding upstream 913997 44034316 ~ 44034840 (+)
wrap73 wrap73 coding upstream 1183975 43743468 ~ 43764862 (+)
prex1 LOC106572294 coding downstream 10154 44959576 ~ 45073059 (+)
LOC110532183 LOC106572183 coding downstream 127142 45076564 ~ 45119186 (+)
LOC110532184 LOC106572184 coding downstream 127489 45076911 ~ 45085575 (+)
chrna4b LOC106572182 coding downstream 230983 45176863 ~ 45191840 (+)
LOC110532188 LOC106572179 coding downstream 336558 45285980 ~ 45298752 (+)
G808199 NA non-coding upstream 43508 44905105 ~ 44905329 (+)
G808188 NA non-coding upstream 70455 44878183 ~ 44878382 (+)
G808184 NA non-coding upstream 75207 44873392 ~ 44873630 (+)
G808145 NA non-coding upstream 166416 44781494 ~ 44782421 (+)
G808032 NA non-coding upstream 441360 44507248 ~ 44507477 (+)
G808244 NA non-coding downstream 44393 44993815 ~ 44995385 (+)
G808262 NA non-coding downstream 124651 45074073 ~ 45074321 (+)
G808702 NA non-coding downstream 199058 45148480 ~ 45148705 (+)
G808703 NA non-coding downstream 199362 45148784 ~ 45148984 (+)
G808712 NA non-coding downstream 204149 45153571 ~ 45153891 (+)
G807841 NA other upstream 495760 44442662 ~ 44453077 (+)
G807677 NA other upstream 752796 44195715 ~ 44196041 (+)
G805600 NA other upstream 2600051 42346176 ~ 42348786 (+)
G805451 NA other upstream 2616399 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 2924434 42021496 ~ 42027071 (+)
G809685 NA other downstream 1185309 46134731 ~ 46135732 (+)
G812143 NA other downstream 3032579 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 3596032 48545454 ~ 48570593 (+)
G813071 NA other downstream 4010327 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 4053897 48962187 ~ 49006710 (+)

Expression


Co-expression Network