Gene
RNA
| Item | Value |
|---|---|
| gene id | G808601 |
| gene name | LOC106572185 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 44952010 ~ 44952679 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ral GTPase-activating protein subunit beta-like isoform X7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU920038 | True | 343 | lncRNA | 0.48 | 2 | 44952010 | 44952679 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532180 | LOC106572190 | coding | downstream | 81719 | 44863031 ~ 44870291 (-) |
| mtor | mtor | coding | downstream | 495051 | 44333485 ~ 44456959 (-) |
| LOC110532177 | LOC106572192 | coding | downstream | 508001 | 44442368 ~ 44444009 (-) |
| tafa5l | LOC106572193 | coding | downstream | 659613 | 44247091 ~ 44292397 (-) |
| mapk13 | mk13 | coding | downstream | 745545 | 44196588 ~ 44249763 (-) |
| LOC100136637 | LOC100329213 | coding | upstream | 270000 | 45222679 ~ 45224379 (-) |
| rtel1 | rtel1 | coding | upstream | 272526 | 45225205 ~ 45281464 (-) |
| pdyn | pdyn | coding | upstream | 363885 | 45316564 ~ 45318766 (-) |
| LOC110532194 | LOC106572173 | coding | upstream | 545212 | 45497891 ~ 45513979 (-) |
| LOC110532196 | dennd2d | coding | upstream | 593914 | 45546593 ~ 45580976 (-) |
| G808558 | NA | non-coding | downstream | 51721 | 44899975 ~ 44900289 (-) |
| G808550 | NA | non-coding | downstream | 74159 | 44877537 ~ 44877851 (-) |
| G808549 | NA | non-coding | downstream | 75227 | 44876584 ~ 44876783 (-) |
| G808538 | NA | non-coding | downstream | 91575 | 44858300 ~ 44860435 (-) |
| G808530 | NA | non-coding | downstream | 108537 | 44841995 ~ 44843473 (-) |
| G808623 | NA | non-coding | upstream | 118235 | 45070914 ~ 45073040 (-) |
| G808664 | NA | non-coding | upstream | 146496 | 45099175 ~ 45100363 (-) |
| G808707 | NA | non-coding | upstream | 197921 | 45150600 ~ 45150829 (-) |
| G808723 | NA | non-coding | upstream | 208152 | 45160831 ~ 45161055 (-) |
| G808725 | NA | non-coding | upstream | 209243 | 45161922 ~ 45162313 (-) |
| G808375 | NA | other | downstream | 315164 | 44634559 ~ 44636846 (-) |
| G807941 | NA | other | downstream | 589844 | 44361416 ~ 44362166 (-) |
| prdm16 | prdm16 | other | downstream | 936554 | 43781726 ~ 44015554 (-) |
| G806724 | LOC106572208 | other | downstream | 1619307 | 43331930 ~ 43339589 (-) |
| G809071 | LOC106572179 | other | upstream | 343177 | 45295856 ~ 45298740 (-) |
| zmynd12 | zmynd12 | other | upstream | 1234585 | 46187156 ~ 46200250 (-) |
| G810563 | NA | other | upstream | 1300835 | 46253514 ~ 46256922 (-) |
| G811300 | NA | other | upstream | 2226125 | 47178804 ~ 47181797 (-) |
