G808262


Basic Information

Item Value
gene id G808262
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45074073 ~ 45074321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU919673
gagaagttgcgcccggaggatgtgttggtaccattctttattcatggctgtgttcttagacaAAATTGTGAGCGAGCCCACTCcctttggctgagaagcaaccccacacatgaatggtcttaggatgctttactgttggcatgacacaggactgatggtagcgctcacctcgtcttctccggacaagcttttttccggatgccccaaacaattggaaaggggattcgtcagagaaaatgactttacccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU919673 True 249 lncRNA 0.49 1 45074073 45074321

Neighbor

gene id symbol gene type direction distance location
prex1 LOC106572294 coding upstream 1014 44959576 ~ 45073059 (+)
LOC110532181 LOC106572185 coding upstream 114951 44912964 ~ 44959122 (+)
LOC110532179 LOC106572187 coding upstream 216159 44800010 ~ 44857914 (+)
agrn LOC106572186 coding upstream 283230 44511053 ~ 44790843 (+)
LOC110532176 LOC106572191 coding upstream 644972 44425014 ~ 44429101 (+)
LOC110532183 LOC106572183 coding downstream 2243 45076564 ~ 45119186 (+)
LOC110532184 LOC106572184 coding downstream 2590 45076911 ~ 45085575 (+)
chrna4b LOC106572182 coding downstream 106084 45176863 ~ 45191840 (+)
LOC110532188 LOC106572179 coding downstream 211659 45285980 ~ 45298752 (+)
LOC110532189 gmeb2 coding downstream 229045 45303366 ~ 45311274 (+)
G808244 NA non-coding upstream 78688 44993815 ~ 44995385 (+)
G808212 NA non-coding upstream 124651 44948837 ~ 44949422 (+)
G808199 NA non-coding upstream 168744 44905105 ~ 44905329 (+)
G808188 NA non-coding upstream 195691 44878183 ~ 44878382 (+)
G808184 NA non-coding upstream 200443 44873392 ~ 44873630 (+)
G808702 NA non-coding downstream 74159 45148480 ~ 45148705 (+)
G808703 NA non-coding downstream 74463 45148784 ~ 45148984 (+)
G808712 NA non-coding downstream 79250 45153571 ~ 45153891 (+)
G808722 NA non-coding downstream 85954 45160275 ~ 45160483 (+)
G808724 NA non-coding downstream 87173 45161494 ~ 45161862 (+)
G807841 NA other upstream 620996 44442662 ~ 44453077 (+)
G807677 NA other upstream 878032 44195715 ~ 44196041 (+)
G805600 NA other upstream 2725287 42346176 ~ 42348786 (+)
G805451 NA other upstream 2741635 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 3049670 42021496 ~ 42027071 (+)
G809685 NA other downstream 1060410 46134731 ~ 46135732 (+)
G812143 NA other downstream 2907680 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 3471133 48545454 ~ 48570593 (+)
G813071 NA other downstream 3885428 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 3928998 48962187 ~ 49006710 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G51270 NA non-coding CI01000009 null 2399778 ~ 2400894 (+)
tiger barb (Puntius tetrazona) G39503 NA non-coding NC_056703.1 CM032072.1 25557296 ~ 25557522 (-)