G808712


Basic Information

Item Value
gene id G808712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45153571 ~ 45153891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU920157
tcatgaaatgggtttccatggccgagcagccacacacaagcctaagctcaccatgcgcaatgccaagcgtcggctggagtggtgtaaagctcgccgccattgaactctggagcagtggaaacacattttctggagtgattaatcactcttcaccatctggcagtccaacaggacaaatctgggtttggcggatgccaggagaacgctacctgctccaATGCGTGGACgccagtccctgcagcaatgttccaacatctagttgaaagccttcccagaggattggaggctgctataacagcaaagggggaccaactccatatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU920157 True 321 lncRNA 0.52 1 45153571 45153891

Neighbor

gene id symbol gene type direction distance location
LOC110532183 LOC106572183 coding upstream 34385 45076564 ~ 45119186 (+)
LOC110532184 LOC106572184 coding upstream 67996 45076911 ~ 45085575 (+)
prex1 LOC106572294 coding upstream 80512 44959576 ~ 45073059 (+)
LOC110532181 LOC106572185 coding upstream 194449 44912964 ~ 44959122 (+)
LOC110532179 LOC106572187 coding upstream 295657 44800010 ~ 44857914 (+)
chrna4b LOC106572182 coding downstream 26514 45176863 ~ 45191840 (+)
LOC110532188 LOC106572179 coding downstream 132089 45285980 ~ 45298752 (+)
LOC110532189 gmeb2 coding downstream 149475 45303366 ~ 45311274 (+)
LOC118966054 NA coding downstream 161883 45315766 ~ 45318483 (+)
LOC110532191 stk35 coding downstream 252231 45406122 ~ 45424517 (+)
G808703 NA non-coding upstream 4587 45148784 ~ 45148984 (+)
G808702 NA non-coding upstream 4866 45148480 ~ 45148705 (+)
G808262 NA non-coding upstream 79250 45074073 ~ 45074321 (+)
G808244 NA non-coding upstream 158186 44993815 ~ 44995385 (+)
G808212 NA non-coding upstream 204149 44948837 ~ 44949422 (+)
G808722 NA non-coding downstream 6384 45160275 ~ 45160483 (+)
G808724 NA non-coding downstream 7603 45161494 ~ 45161862 (+)
G808777 NA non-coding downstream 67201 45221092 ~ 45221372 (+)
G808783 rtel1 non-coding downstream 73550 45227441 ~ 45237572 (+)
G807841 NA other upstream 700494 44442662 ~ 44453077 (+)
G807677 NA other upstream 957530 44195715 ~ 44196041 (+)
G805600 NA other upstream 2804785 42346176 ~ 42348786 (+)
G805451 NA other upstream 2821133 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 3129168 42021496 ~ 42027071 (+)
G809685 NA other downstream 980840 46134731 ~ 46135732 (+)
G812143 NA other downstream 2828110 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 3391563 48545454 ~ 48570593 (+)
G813071 NA other downstream 3805858 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 3849428 48962187 ~ 49006710 (+)

Expression


Co-expression Network