Gene
RNA
| Item | Value |
|---|---|
| gene id | G808723 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 45160831 ~ 45161055 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU920168 | True | 225 | lncRNA | 0.40 | 1 | 45160831 | 45161055 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532180 | LOC106572190 | coding | downstream | 290540 | 44863031 ~ 44870291 (-) |
| mtor | mtor | coding | downstream | 703872 | 44333485 ~ 44456959 (-) |
| LOC110532177 | LOC106572192 | coding | downstream | 716822 | 44442368 ~ 44444009 (-) |
| tafa5l | LOC106572193 | coding | downstream | 868434 | 44247091 ~ 44292397 (-) |
| mapk13 | mk13 | coding | downstream | 954366 | 44196588 ~ 44249763 (-) |
| LOC100136637 | LOC100329213 | coding | upstream | 61624 | 45222679 ~ 45224379 (-) |
| rtel1 | rtel1 | coding | upstream | 64150 | 45225205 ~ 45281464 (-) |
| pdyn | pdyn | coding | upstream | 155509 | 45316564 ~ 45318766 (-) |
| LOC110532194 | LOC106572173 | coding | upstream | 336836 | 45497891 ~ 45513979 (-) |
| LOC110532196 | dennd2d | coding | upstream | 385538 | 45546593 ~ 45580976 (-) |
| G808707 | NA | non-coding | downstream | 10002 | 45150600 ~ 45150829 (-) |
| G808664 | NA | non-coding | downstream | 60468 | 45099175 ~ 45100363 (-) |
| G808623 | NA | non-coding | downstream | 87791 | 45070914 ~ 45073040 (-) |
| G808601 | LOC106572185 | non-coding | downstream | 208152 | 44952010 ~ 44952679 (-) |
| G808558 | NA | non-coding | downstream | 260542 | 44899975 ~ 44900289 (-) |
| G808725 | NA | non-coding | upstream | 867 | 45161922 ~ 45162313 (-) |
| G808728 | NA | non-coding | upstream | 2730 | 45163785 ~ 45163986 (-) |
| G808733 | NA | non-coding | upstream | 4627 | 45165682 ~ 45166040 (-) |
| G809028 | NA | non-coding | upstream | 60020 | 45221075 ~ 45221294 (-) |
| G808994 | NA | non-coding | upstream | 93023 | 45254078 ~ 45255216 (-) |
| G808375 | NA | other | downstream | 523985 | 44634559 ~ 44636846 (-) |
| G807941 | NA | other | downstream | 798665 | 44361416 ~ 44362166 (-) |
| prdm16 | prdm16 | other | downstream | 1145375 | 43781726 ~ 44015554 (-) |
| G806724 | LOC106572208 | other | downstream | 1828128 | 43331930 ~ 43339589 (-) |
| G809071 | LOC106572179 | other | upstream | 134801 | 45295856 ~ 45298740 (-) |
| zmynd12 | zmynd12 | other | upstream | 1026209 | 46187156 ~ 46200250 (-) |
| G810563 | NA | other | upstream | 1092459 | 46253514 ~ 46256922 (-) |
| G811300 | NA | other | upstream | 2017749 | 47178804 ~ 47181797 (-) |
