G808823


Basic Information

Item Value
gene id G808823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45283986 ~ 45327942 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU920299
aggcagcatcatgttgtgggggtgcttagctgcaagagggactggtgcacttcacaaaatagatggcatcatgaggcaggaaaattatgtggatatattgaagcaacatctcaagacatcagtcagaaagttaaagcttggtcacaaatgggtcttccaaatgaacaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacacagtcaaggtattggagtggccatcacaaagccctgacctcaatcctatagaacatttttgggcagaactgaaaaagcgtgtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU920299 True 302 lncRNA 0.44 2 45283986 45327942

Neighbor

gene id symbol gene type direction distance location
chrna4b LOC106572182 coding upstream 92146 45176863 ~ 45191840 (+)
LOC110532183 LOC106572183 coding upstream 164800 45076564 ~ 45119186 (+)
LOC110532184 LOC106572184 coding upstream 198411 45076911 ~ 45085575 (+)
prex1 LOC106572294 coding upstream 210927 44959576 ~ 45073059 (+)
LOC110532181 LOC106572185 coding upstream 324864 44912964 ~ 44959122 (+)
LOC110532191 stk35 coding downstream 78180 45406122 ~ 45424517 (+)
LOC110532193 LOC106572175 coding downstream 134686 45462628 ~ 45484801 (+)
LOC110532192 LOC106572174 coding downstream 157730 45485672 ~ 45494087 (+)
LOC110532197 cept1 coding downstream 190100 45518042 ~ 45541267 (+)
LOC110532198 dram2 coding downstream 213501 45541443 ~ 45546493 (+)
G808793 rtel1 non-coding upstream 30983 45241313 ~ 45253003 (+)
G808783 rtel1 non-coding upstream 46414 45227441 ~ 45237572 (+)
G808777 NA non-coding upstream 62614 45221092 ~ 45221372 (+)
G808724 NA non-coding upstream 122124 45161494 ~ 45161862 (+)
G808863 NA non-coding downstream 30250 45358192 ~ 45358415 (+)
G808869 NA non-coding downstream 38577 45366519 ~ 45366894 (+)
G808874 NA non-coding downstream 45956 45373898 ~ 45374231 (+)
G809234 NA non-coding downstream 271397 45599339 ~ 45604558 (+)
G809248 LOC106572168 non-coding downstream 288202 45616144 ~ 45616483 (+)
G807841 NA other upstream 830909 44442662 ~ 44453077 (+)
G807677 NA other upstream 1087945 44195715 ~ 44196041 (+)
G805600 NA other upstream 2935200 42346176 ~ 42348786 (+)
G805451 NA other upstream 2951548 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 3259583 42021496 ~ 42027071 (+)
G809685 NA other downstream 806789 46134731 ~ 46135732 (+)
G812143 NA other downstream 2654059 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 3217512 48545454 ~ 48570593 (+)
G813071 NA other downstream 3631807 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 3675377 48962187 ~ 49006710 (+)

Expression


Co-expression Network