G808874


Basic Information

Item Value
gene id G808874
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45373898 ~ 45374231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU920351
cagccatactgctcattctgtgcgtgatttcctacaagacaggaatgtcagtgttctgccatggccagcgacgagcacggatctcaatcccattgagcatacctgggacctgttggatcggagggtgagggctaaggccattccccccagaaatgtctgggaacttgcaggtgccttggtggaagagtggggtaacatctcacagcaagaactggcaaatctggtgcagtccatgaggaggggatacactgcagtacttaatgcagctggttttgaccccacctttgttcagggacacattattccatttctgttagtcacatgtctgtggaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU920351 True 334 lncRNA 0.51 1 45373898 45374231

Neighbor

gene id symbol gene type direction distance location
LOC118966054 NA coding upstream 56100 45315766 ~ 45318483 (+)
LOC110532189 gmeb2 coding upstream 62624 45303366 ~ 45311274 (+)
LOC110532188 LOC106572179 coding upstream 75146 45285980 ~ 45298752 (+)
chrna4b LOC106572182 coding upstream 182058 45176863 ~ 45191840 (+)
LOC110532184 LOC106572184 coding upstream 288323 45076911 ~ 45085575 (+)
LOC110532191 stk35 coding downstream 31891 45406122 ~ 45424517 (+)
LOC110532193 LOC106572175 coding downstream 88397 45462628 ~ 45484801 (+)
LOC110532192 LOC106572174 coding downstream 111441 45485672 ~ 45494087 (+)
LOC110532197 cept1 coding downstream 143811 45518042 ~ 45541267 (+)
LOC110532198 dram2 coding downstream 167212 45541443 ~ 45546493 (+)
G808869 NA non-coding upstream 7004 45366519 ~ 45366894 (+)
G808863 NA non-coding upstream 15483 45358192 ~ 45358415 (+)
G808823 NA non-coding upstream 45956 45283986 ~ 45327942 (+)
G808793 rtel1 non-coding upstream 120895 45241313 ~ 45253003 (+)
G809234 NA non-coding downstream 225108 45599339 ~ 45604558 (+)
G809248 LOC106572168 non-coding downstream 241913 45616144 ~ 45616483 (+)
G809249 NA non-coding downstream 242647 45616878 ~ 45617212 (+)
G809256 efhd2 non-coding downstream 257541 45631772 ~ 45715145 (+)
G809267 lrif1 non-coding downstream 266133 45640364 ~ 45643150 (+)
G807841 NA other upstream 920821 44442662 ~ 44453077 (+)
G807677 NA other upstream 1177857 44195715 ~ 44196041 (+)
G805600 NA other upstream 3025112 42346176 ~ 42348786 (+)
G805451 NA other upstream 3041460 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 3349495 42021496 ~ 42027071 (+)
G809685 NA other downstream 760500 46134731 ~ 46135732 (+)
G812143 NA other downstream 2607770 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 3171223 48545454 ~ 48570593 (+)
G813071 NA other downstream 3585518 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 3629088 48962187 ~ 49006710 (+)

Expression


Co-expression Network