G809439


Basic Information

Item Value
gene id G809439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45788180 ~ 45841304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU920981
gttcacaaatgctctccatccaacctcactgaacttctggagagagtttgctgcactgaaagtaaatgggctgaataattttgcgcgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcctgattgtgtcccacttgttgttgattcttcacaaaaaaaatacagttttatatctttatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU920981 True 213 lncRNA 0.35 2 45788180 45841304

Neighbor

gene id symbol gene type direction distance location
ela2l LOC106572163 coding upstream 13172 45771365 ~ 45775008 (+)
LOC110532198 dram2 coding upstream 241687 45541443 ~ 45546493 (+)
LOC110532197 cept1 coding upstream 246913 45518042 ~ 45541267 (+)
LOC110532192 LOC106572174 coding upstream 294093 45485672 ~ 45494087 (+)
LOC110532193 LOC106572175 coding upstream 303379 45462628 ~ 45484801 (+)
LOC110532211 LOC106572158 coding downstream 317645 46158949 ~ 46185603 (+)
ccdc30 ccdc30 coding downstream 366092 46207396 ~ 46249943 (+)
LOC110532217 LOC106572155 coding downstream 421903 46263207 ~ 46277905 (+)
LOC118966055 NA coding downstream 459960 46301264 ~ 46304747 (+)
LOC118966056 NA coding downstream 467708 46309012 ~ 46310775 (+)
G809438 NA non-coding upstream 1421 45786407 ~ 45786759 (+)
G809344 NA non-coding upstream 21108 45766665 ~ 45767072 (+)
G809342 NA non-coding upstream 24122 45760116 ~ 45764058 (+)
G809340 NA non-coding upstream 30848 45757117 ~ 45757332 (+)
G809329 NA non-coding upstream 45121 45742807 ~ 45743059 (+)
G809617 NA non-coding downstream 199341 46040645 ~ 46041255 (+)
G809666 NA non-coding downstream 265088 46106392 ~ 46106592 (+)
G809687 NA non-coding downstream 299696 46141000 ~ 46141200 (+)
G809691 NA non-coding downstream 303159 46144463 ~ 46144679 (+)
G809979 NA non-coding downstream 361424 46202728 ~ 46203412 (+)
G807841 NA other upstream 1335103 44442662 ~ 44453077 (+)
G807677 NA other upstream 1592139 44195715 ~ 44196041 (+)
G805600 NA other upstream 3439394 42346176 ~ 42348786 (+)
G805451 NA other upstream 3455742 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 3763777 42021496 ~ 42027071 (+)
G809685 NA other downstream 293427 46134731 ~ 46135732 (+)
G812143 NA other downstream 2140697 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 2704150 48545454 ~ 48570593 (+)
G813071 NA other downstream 3118445 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 3162015 48962187 ~ 49006710 (+)

Expression


Co-expression Network