G809685


Basic Information

Item Value
gene id G809685
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 46134731 ~ 46135732 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU921250
atacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagtgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggattcggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacttggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcgctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatgggggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgtcttgcaaggaggaatggga

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU921250 True 1002 TUCP 0.44 1 46134731 46135732

Neighbor

gene id symbol gene type direction distance location
ela2l LOC106572163 coding upstream 359723 45771365 ~ 45775008 (+)
LOC110532198 dram2 coding upstream 588238 45541443 ~ 45546493 (+)
LOC110532197 cept1 coding upstream 593464 45518042 ~ 45541267 (+)
LOC110532192 LOC106572174 coding upstream 640644 45485672 ~ 45494087 (+)
LOC110532193 LOC106572175 coding upstream 649930 45462628 ~ 45484801 (+)
LOC110532211 LOC106572158 coding downstream 23217 46158949 ~ 46185603 (+)
ccdc30 ccdc30 coding downstream 71664 46207396 ~ 46249943 (+)
LOC110532217 LOC106572155 coding downstream 127475 46263207 ~ 46277905 (+)
LOC118966055 NA coding downstream 165532 46301264 ~ 46304747 (+)
LOC118966056 NA coding downstream 173280 46309012 ~ 46310775 (+)
G809666 NA non-coding upstream 28139 46106392 ~ 46106592 (+)
G809617 NA non-coding upstream 93476 46040645 ~ 46041255 (+)
G809439 NA non-coding upstream 293427 45788180 ~ 45841304 (+)
G809441 NA non-coding upstream 345121 45788755 ~ 45789610 (+)
G809438 NA non-coding upstream 347972 45786407 ~ 45786759 (+)
G809687 NA non-coding downstream 5268 46141000 ~ 46141200 (+)
G809691 NA non-coding downstream 8731 46144463 ~ 46144679 (+)
G809979 NA non-coding downstream 66996 46202728 ~ 46203412 (+)
G809980 emp3 non-coding downstream 68876 46204608 ~ 46205463 (+)
G810023 NA non-coding downstream 114580 46250312 ~ 46252923 (+)
G807841 NA other upstream 1681654 44442662 ~ 44453077 (+)
G807677 NA other upstream 1938690 44195715 ~ 44196041 (+)
G805600 NA other upstream 3785945 42346176 ~ 42348786 (+)
G805451 NA other upstream 3802293 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 4110328 42021496 ~ 42027071 (+)
G812143 NA other downstream 1846269 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 2409722 48545454 ~ 48570593 (+)
G813071 NA other downstream 2824017 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 2867587 48962187 ~ 49006710 (+)
G813139 NA other downstream 2979405 49115137 ~ 49115618 (+)

Expression


Co-expression Network