G809687


Basic Information

Item Value
gene id G809687
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 46141000 ~ 46141200 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU921255
CTCTGAgtagttaaggtaagggttaaggtttgggataggcttagaACAAAAATAAGTTTTTATTGCTGGATTTGAATATGAAACCTTTGGAACCTTAGCAAAACCAAAGCCTACTTGAAGGCAACAGCCCTCACTGTTGTCTCTAATAGCTGATTGCCAAGTGGCCCGCCAATGGATATGCATCCAGCTGCAGCACCAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU921255 True 201 lncRNA 0.43 1 46141000 46141200

Neighbor

gene id symbol gene type direction distance location
ela2l LOC106572163 coding upstream 365992 45771365 ~ 45775008 (+)
LOC110532198 dram2 coding upstream 594507 45541443 ~ 45546493 (+)
LOC110532197 cept1 coding upstream 599733 45518042 ~ 45541267 (+)
LOC110532192 LOC106572174 coding upstream 646913 45485672 ~ 45494087 (+)
LOC110532193 LOC106572175 coding upstream 656199 45462628 ~ 45484801 (+)
LOC110532211 LOC106572158 coding downstream 17749 46158949 ~ 46185603 (+)
ccdc30 ccdc30 coding downstream 66196 46207396 ~ 46249943 (+)
LOC110532217 LOC106572155 coding downstream 122007 46263207 ~ 46277905 (+)
LOC118966055 NA coding downstream 160064 46301264 ~ 46304747 (+)
LOC118966056 NA coding downstream 167812 46309012 ~ 46310775 (+)
G809666 NA non-coding upstream 34408 46106392 ~ 46106592 (+)
G809617 NA non-coding upstream 99745 46040645 ~ 46041255 (+)
G809439 NA non-coding upstream 299696 45788180 ~ 45841304 (+)
G809441 NA non-coding upstream 351390 45788755 ~ 45789610 (+)
G809438 NA non-coding upstream 354241 45786407 ~ 45786759 (+)
G809691 NA non-coding downstream 3263 46144463 ~ 46144679 (+)
G809979 NA non-coding downstream 61528 46202728 ~ 46203412 (+)
G809980 emp3 non-coding downstream 63408 46204608 ~ 46205463 (+)
G810023 NA non-coding downstream 109112 46250312 ~ 46252923 (+)
G810027 NA non-coding downstream 112340 46253540 ~ 46254132 (+)
G809685 NA other upstream 5268 46134731 ~ 46135732 (+)
G807841 NA other upstream 1687923 44442662 ~ 44453077 (+)
G807677 NA other upstream 1944959 44195715 ~ 44196041 (+)
G805600 NA other upstream 3792214 42346176 ~ 42348786 (+)
G805451 NA other upstream 3808562 42332093 ~ 42332438 (+)
G812143 NA other downstream 1840801 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 2404254 48545454 ~ 48570593 (+)
G813071 NA other downstream 2818549 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 2862119 48962187 ~ 49006710 (+)
G813139 NA other downstream 2973937 49115137 ~ 49115618 (+)

Expression


Co-expression Network